Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
SDHCQ99643 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHCQ99643 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.66■□□□□ 0.26
SDHCQ99643 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHCQ99643 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 AC120498.10-201ENST00000621827 505 ntBASIC16.66■□□□□ 0.26
SDHCQ99643 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SDHCQ99643 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHCQ99643 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHCQ99643 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.66■□□□□ 0.26
SDHCQ99643 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.66■□□□□ 0.26
SDHCQ99643 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SDHCQ99643 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHCQ99643 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
SDHCQ99643 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.65■□□□□ 0.26
SDHCQ99643 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.65■□□□□ 0.26
SDHCQ99643 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.65■□□□□ 0.26
SDHCQ99643 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.65■□□□□ 0.26
SDHCQ99643 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHCQ99643 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SDHCQ99643 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SDHCQ99643 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SDHCQ99643 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.65■□□□□ 0.26
SDHCQ99643 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
SDHCQ99643 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SDHCQ99643 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SDHCQ99643 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.64■□□□□ 0.25
SDHCQ99643 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.64■□□□□ 0.25
SDHCQ99643 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 SLC7A5P2-201ENST00000553010 536 ntBASIC16.64■□□□□ 0.25
SDHCQ99643 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SDHCQ99643 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SDHCQ99643 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.63■□□□□ 0.25
SDHCQ99643 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.63■□□□□ 0.25
SDHCQ99643 AC087633.2-202ENST00000565166 1439 ntBASIC16.63■□□□□ 0.25
SDHCQ99643 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHCQ99643 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHCQ99643 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHCQ99643 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.63■□□□□ 0.25
SDHCQ99643 AC108860.2-201ENST00000562760 2183 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms