Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP53Q96M91 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP53Q96M91 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP53Q96M91 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP53Q96M91 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP53Q96M91 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP53Q96M91 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP53Q96M91 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CFAP53Q96M91 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP53Q96M91 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP53Q96M91 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CFAP53Q96M91 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
CFAP53Q96M91 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CFAP53Q96M91 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CFAP53Q96M91 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 SDHAP1-207ENST00000440850 2000 ntBASIC25.82■■□□□ 1.72
CFAP53Q96M91 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 MIR1238-201ENST00000408483 83 ntBASIC25.82■■□□□ 1.72
CFAP53Q96M91 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 AC097488.1-201ENST00000507834 756 ntBASIC25.82■■□□□ 1.72
CFAP53Q96M91 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP53Q96M91 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP53Q96M91 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 MMP23A-201ENST00000234610 1017 ntBASIC25.81■■□□□ 1.72
CFAP53Q96M91 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 FITM1-202ENST00000559294 800 ntBASIC25.81■■□□□ 1.72
CFAP53Q96M91 SLC25A1P4-201ENST00000567977 778 ntBASIC25.81■■□□□ 1.72
CFAP53Q96M91 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP53Q96M91 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CFAP53Q96M91 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CFAP53Q96M91 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CFAP53Q96M91 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms