Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 AC125437.2-201ENST00000625180 2167 ntBASIC19.87■□□□□ 0.77
IFT43Q96FT9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 PRKY-204ENST00000533551 1019 ntBASIC19.87■□□□□ 0.77
IFT43Q96FT9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 AP006587.1-201ENST00000534129 1502 ntBASIC19.86■□□□□ 0.77
IFT43Q96FT9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
IFT43Q96FT9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IFT43Q96FT9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IFT43Q96FT9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
IFT43Q96FT9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.86■□□□□ 0.77
IFT43Q96FT9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 SNORA78-201ENST00000459373 127 ntBASIC19.85■□□□□ 0.77
IFT43Q96FT9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IFT43Q96FT9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.85■□□□□ 0.77
IFT43Q96FT9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 KRASP1-201ENST00000407852 552 ntBASIC19.84■□□□□ 0.77
IFT43Q96FT9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 RARRES2P10-201ENST00000564312 460 ntBASIC19.84■□□□□ 0.77
IFT43Q96FT9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
IFT43Q96FT9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IFT43Q96FT9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
IFT43Q96FT9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IFT43Q96FT9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms