Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 AL137784.2-201ENST00000607332 1000 ntBASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 IKBKGP1-201ENST00000612193 1073 ntBASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 AC073111.5-205ENST00000641717 521 ntBASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC47A1Q96FL8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 C2orf69P4-201ENST00000565394 541 ntBASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC47A1Q96FL8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 LSM12P1-201ENST00000411836 588 ntBASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 AC079598.2-202ENST00000546624 1451 ntBASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC47A1Q96FL8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 KRT17P1-201ENST00000399211 1546 ntBASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC47A1Q96FL8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms