Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 AC007663.1-201ENST00000438948 1240 ntBASIC20.91■□□□□ 0.94
PGBD4Q96DM1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PGBD4Q96DM1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 AC092338.2-201ENST00000568827 1415 ntBASIC20.9■□□□□ 0.94
PGBD4Q96DM1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 CKBP1-201ENST00000565489 1086 ntBASIC20.9■□□□□ 0.94
PGBD4Q96DM1 AL353719.1-201ENST00000566847 864 ntBASIC20.9■□□□□ 0.94
PGBD4Q96DM1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 AL023803.3-201ENST00000615559 522 ntBASIC20.9■□□□□ 0.94
PGBD4Q96DM1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 AC099778.1-201ENST00000568593 1911 ntBASIC20.9■□□□□ 0.94
PGBD4Q96DM1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PGBD4Q96DM1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD4Q96DM1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
PGBD4Q96DM1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD4Q96DM1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PGBD4Q96DM1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.89■□□□□ 0.94
PGBD4Q96DM1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PGBD4Q96DM1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 AL512604.3-201ENST00000569583 964 ntBASIC20.88■□□□□ 0.93
PGBD4Q96DM1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 AC006011.2-201ENST00000621313 1158 ntBASIC20.88■□□□□ 0.93
PGBD4Q96DM1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PGBD4Q96DM1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PGBD4Q96DM1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PGBD4Q96DM1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
PGBD4Q96DM1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms