Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF183Q96D59 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF183Q96D59 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 TUBB8P6-201ENST00000436895 1288 ntBASIC14.28□□□□□ -0.12
RNF183Q96D59 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF183Q96D59 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF183Q96D59 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RNF183Q96D59 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RNF183Q96D59 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF183Q96D59 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF183Q96D59 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
RNF183Q96D59 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RNF183Q96D59 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF183Q96D59 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF183Q96D59 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
RNF183Q96D59 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF183Q96D59 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF183Q96D59 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.27□□□□□ -0.12
RNF183Q96D59 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
RNF183Q96D59 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF183Q96D59 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 KRT18P16-201ENST00000510337 1294 ntBASIC14.27□□□□□ -0.13
RNF183Q96D59 AL355075.4-201ENST00000554988 638 ntBASIC14.27□□□□□ -0.13
RNF183Q96D59 C1QL1P1-201ENST00000568105 661 ntBASIC14.27□□□□□ -0.13
RNF183Q96D59 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.27□□□□□ -0.13
RNF183Q96D59 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF183Q96D59 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF183Q96D59 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RNF183Q96D59 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF183Q96D59 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF183Q96D59 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.26□□□□□ -0.13
RNF183Q96D59 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RNF183Q96D59 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF183Q96D59 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 KRT16P1-201ENST00000399124 1418 ntBASIC14.26□□□□□ -0.13
RNF183Q96D59 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.26□□□□□ -0.13
RNF183Q96D59 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RNF183Q96D59 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF183Q96D59 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF183Q96D59 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 NUDT16P1-203ENST00000513809 620 ntBASIC14.26□□□□□ -0.13
RNF183Q96D59 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF183Q96D59 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RNF183Q96D59 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.26□□□□□ -0.13
RNF183Q96D59 CR392000.1-201ENST00000624770 1228 ntBASIC14.26□□□□□ -0.13
RNF183Q96D59 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RNF183Q96D59 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RNF183Q96D59 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.26□□□□□ -0.13
RNF183Q96D59 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
RNF183Q96D59 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNF183Q96D59 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RNF183Q96D59 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 AP005212.1-201ENST00000581547 1997 ntBASIC14.25□□□□□ -0.13
RNF183Q96D59 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RNF183Q96D59 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF183Q96D59 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF183Q96D59 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms