Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLNQ969V3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NCLNQ969V3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLNQ969V3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.7■□□□□ 0.58
NCLNQ969V3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NCLNQ969V3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCLNQ969V3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLNQ969V3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NCLNQ969V3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCLNQ969V3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
NCLNQ969V3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.69■□□□□ 0.58
NCLNQ969V3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLNQ969V3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
NCLNQ969V3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLNQ969V3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLNQ969V3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NCLNQ969V3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLNQ969V3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.69■□□□□ 0.58
NCLNQ969V3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 Z82202.1-201ENST00000623446 1880 ntBASIC18.69■□□□□ 0.58
NCLNQ969V3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NCLNQ969V3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCLNQ969V3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
NCLNQ969V3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NCLNQ969V3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCLNQ969V3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLNQ969V3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 PTBP1P-201ENST00000554374 1601 ntBASIC18.68■□□□□ 0.58
NCLNQ969V3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.68■□□□□ 0.58
NCLNQ969V3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NCLNQ969V3 KRT18P29-201ENST00000397031 1267 ntBASIC18.68■□□□□ 0.58
NCLNQ969V3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCLNQ969V3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.68■□□□□ 0.58
NCLNQ969V3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.68■□□□□ 0.58
NCLNQ969V3 ITM2C-210ENST00000620962 501 ntBASIC18.68■□□□□ 0.58
NCLNQ969V3 TMEM191A-211ENST00000637163 1067 ntBASIC18.68■□□□□ 0.58
NCLNQ969V3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.68■□□□□ 0.58
NCLNQ969V3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCLNQ969V3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
NCLNQ969V3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NCLNQ969V3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.67■□□□□ 0.58
NCLNQ969V3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.67■□□□□ 0.58
NCLNQ969V3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.67■□□□□ 0.58
NCLNQ969V3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.67■□□□□ 0.58
NCLNQ969V3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NCLNQ969V3 AC008687.6-201ENST00000596318 630 ntBASIC18.67■□□□□ 0.58
NCLNQ969V3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NCLNQ969V3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 AC009237.14-201ENST00000609975 1594 ntBASIC18.67■□□□□ 0.58
NCLNQ969V3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NCLNQ969V3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCLNQ969V3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCLNQ969V3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.66■□□□□ 0.58
NCLNQ969V3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms