Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBE2E3Q969T4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 BX323043.1-201ENST00000641006 1765 ntBASIC18.55■□□□□ 0.56
UBE2E3Q969T4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 MIR4651-201ENST00000582622 73 ntBASIC18.55■□□□□ 0.56
UBE2E3Q969T4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE2E3Q969T4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 AC141586.3-201ENST00000562166 1838 ntBASIC18.54■□□□□ 0.56
UBE2E3Q969T4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE2E3Q969T4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2E3Q969T4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms