Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 BX276092.5-203ENST00000456199 560 ntBASIC23.67■■□□□ 1.38
CNKSR1Q969H4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 MIR3180-1-201ENST00000580374 94 ntBASIC23.67■■□□□ 1.38
CNKSR1Q969H4 MIR3180-3-201ENST00000584616 94 ntBASIC23.67■■□□□ 1.38
CNKSR1Q969H4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR1Q969H4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.66■■□□□ 1.38
CNKSR1Q969H4 AC016734.2-201ENST00000624325 1377 ntBASIC23.66■■□□□ 1.38
CNKSR1Q969H4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 KRT8P10-201ENST00000450021 1447 ntBASIC23.66■■□□□ 1.38
CNKSR1Q969H4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR1Q969H4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 PVRIG2P-201ENST00000435460 978 ntBASIC23.65■■□□□ 1.38
CNKSR1Q969H4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.65■■□□□ 1.38
CNKSR1Q969H4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR1Q969H4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR1Q969H4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 UNC93B7-201ENST00000509439 705 ntBASIC23.64■■□□□ 1.37
CNKSR1Q969H4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR1Q969H4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR1Q969H4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR1Q969H4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR1Q969H4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms