Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 MIR572-201ENST00000384983 95 ntBASIC17.02■□□□□ 0.32
AP3S1Q92572 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.02■□□□□ 0.32
AP3S1Q92572 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3S1Q92572 MIR4466-201ENST00000606121 54 ntBASIC17.02■□□□□ 0.32
AP3S1Q92572 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.02■□□□□ 0.31
AP3S1Q92572 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S1Q92572 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
AP3S1Q92572 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S1Q92572 AL512353.2-201ENST00000448759 1962 ntBASIC17.02■□□□□ 0.31
AP3S1Q92572 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S1Q92572 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
AP3S1Q92572 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
AP3S1Q92572 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S1Q92572 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
AP3S1Q92572 ABALON-201ENST00000629058 1903 ntBASIC17.02■□□□□ 0.31
AP3S1Q92572 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3S1Q92572 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.01■□□□□ 0.31
AP3S1Q92572 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.01■□□□□ 0.31
AP3S1Q92572 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
AP3S1Q92572 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.01■□□□□ 0.31
AP3S1Q92572 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.01■□□□□ 0.31
AP3S1Q92572 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.01■□□□□ 0.31
AP3S1Q92572 RARRES2P1-201ENST00000474487 481 ntBASIC17.01■□□□□ 0.31
AP3S1Q92572 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.01■□□□□ 0.31
AP3S1Q92572 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3S1Q92572 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AP3S1Q92572 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17■□□□□ 0.31
AP3S1Q92572 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17■□□□□ 0.31
AP3S1Q92572 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17■□□□□ 0.31
AP3S1Q92572 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17■□□□□ 0.31
AP3S1Q92572 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17■□□□□ 0.31
AP3S1Q92572 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17■□□□□ 0.31
AP3S1Q92572 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP3S1Q92572 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
AP3S1Q92572 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
AP3S1Q92572 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
AP3S1Q92572 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3S1Q92572 SLC7A5P2-201ENST00000553010 536 ntBASIC16.99■□□□□ 0.31
AP3S1Q92572 DUX4L2-201ENST00000561772 1275 ntBASIC16.99■□□□□ 0.31
AP3S1Q92572 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.99■□□□□ 0.31
AP3S1Q92572 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.99■□□□□ 0.31
AP3S1Q92572 TPRG1LP1-201ENST00000598702 760 ntBASIC16.99■□□□□ 0.31
AP3S1Q92572 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms