Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SHC3Q92529 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.61■□□□□ 0.89
SHC3Q92529 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SHC3Q92529 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.61■□□□□ 0.89
SHC3Q92529 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC3Q92529 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHC3Q92529 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.6■□□□□ 0.89
SHC3Q92529 TSPY20P-201ENST00000450910 630 ntBASIC20.6■□□□□ 0.89
SHC3Q92529 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SHC3Q92529 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.6■□□□□ 0.89
SHC3Q92529 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.6■□□□□ 0.89
SHC3Q92529 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.6■□□□□ 0.89
SHC3Q92529 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.6■□□□□ 0.89
SHC3Q92529 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHC3Q92529 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHC3Q92529 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.59■□□□□ 0.89
SHC3Q92529 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.59■□□□□ 0.89
SHC3Q92529 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SHC3Q92529 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SHC3Q92529 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC3Q92529 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC3Q92529 C1QBPP2-201ENST00000528754 825 ntBASIC20.59■□□□□ 0.89
SHC3Q92529 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.59■□□□□ 0.89
SHC3Q92529 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC3Q92529 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.59■□□□□ 0.89
SHC3Q92529 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.59■□□□□ 0.89
SHC3Q92529 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.59■□□□□ 0.89
SHC3Q92529 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.59■□□□□ 0.89
SHC3Q92529 ITM2C-210ENST00000620962 501 ntBASIC20.59■□□□□ 0.89
SHC3Q92529 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHC3Q92529 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SHC3Q92529 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHC3Q92529 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
SHC3Q92529 IRX1P1-201ENST00000438849 1838 ntBASIC20.58■□□□□ 0.89
SHC3Q92529 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHC3Q92529 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.58■□□□□ 0.89
SHC3Q92529 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SHC3Q92529 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHC3Q92529 RPPH1-201ENST00000516869 333 ntBASIC20.58■□□□□ 0.89
SHC3Q92529 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SHC3Q92529 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.58■□□□□ 0.89
SHC3Q92529 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SHC3Q92529 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHC3Q92529 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SHC3Q92529 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.57■□□□□ 0.88
SHC3Q92529 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.57■□□□□ 0.88
SHC3Q92529 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.57■□□□□ 0.88
SHC3Q92529 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHC3Q92529 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHC3Q92529 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms