Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AP005212.1-201ENST00000581547 1997 ntBASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 AL121894.2-201ENST00000602977 491 ntBASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.33■■□□□ 1.65
RAPGEF4Q8WZA2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.33■■□□□ 1.64
RAPGEF4Q8WZA2 AL391422.3-201ENST00000603791 2761 ntBASIC25.33■■□□□ 1.64
RAPGEF4Q8WZA2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 GCSHP2-201ENST00000560971 527 ntBASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 AC069148.1-201ENST00000608741 768 ntBASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
RAPGEF4Q8WZA2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 AL162377.1-201ENST00000618844 1793 ntBASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 STARP1-201ENST00000397973 869 ntBASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 AC083849.1-201ENST00000615227 514 ntBASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RAPGEF4Q8WZA2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 AC007375.3-201ENST00000600936 2314 ntBASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 DUSP5P1-201ENST00000441325 1139 ntBASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 HCG4P8-203ENST00000443049 980 ntBASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 ZNF444P1-201ENST00000559497 298 ntBASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RAPGEF4Q8WZA2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 MIR4674-201ENST00000582457 87 ntBASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 HYMAI.1-201ENST00000620949 238 ntBASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RAPGEF4Q8WZA2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RAPGEF4Q8WZA2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms