Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.04■□□□□ -0
LINC01006Q8NI28 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC01006Q8NI28 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.04■□□□□ -0
LINC01006Q8NI28 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.04■□□□□ -0
LINC01006Q8NI28 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.03■□□□□ -0
LINC01006Q8NI28 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.03■□□□□ -0
LINC01006Q8NI28 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 AC005332.1-201ENST00000577698 1310 ntBASIC15.03■□□□□ -0
LINC01006Q8NI28 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.03■□□□□ -0
LINC01006Q8NI28 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.03■□□□□ -0
LINC01006Q8NI28 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.03■□□□□ -0
LINC01006Q8NI28 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.03■□□□□ -0
LINC01006Q8NI28 NEK4P2-201ENST00000580004 1012 ntBASIC15.03■□□□□ -0
LINC01006Q8NI28 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.03■□□□□ -0
LINC01006Q8NI28 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 AC093458.2-201ENST00000623150 629 ntBASIC15.03■□□□□ -0
LINC01006Q8NI28 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC01006Q8NI28 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01006Q8NI28 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LINC01006Q8NI28 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
LINC01006Q8NI28 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LINC01006Q8NI28 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.02■□□□□ -0
LINC01006Q8NI28 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 AP005212.1-201ENST00000581547 1997 ntBASIC15.02■□□□□ -0
LINC01006Q8NI28 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.02■□□□□ -0
LINC01006Q8NI28 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
LINC01006Q8NI28 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
LINC01006Q8NI28 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINC01006Q8NI28 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.02■□□□□ -0
LINC01006Q8NI28 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.02■□□□□ -0
LINC01006Q8NI28 KRT18P48-201ENST00000434763 852 ntBASIC15.02■□□□□ -0
LINC01006Q8NI28 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.02■□□□□ -0
LINC01006Q8NI28 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01006Q8NI28 KRT126P-201ENST00000549467 1181 ntBASIC15.02■□□□□ -0
LINC01006Q8NI28 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
LINC01006Q8NI28 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.02■□□□□ -0
LINC01006Q8NI28 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LINC01006Q8NI28 AC116407.4-201ENST00000623319 1061 ntBASIC15.02■□□□□ -0
LINC01006Q8NI28 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.02■□□□□ -0
LINC01006Q8NI28 AL391422.3-201ENST00000603791 2761 ntBASIC15.02□□□□□ -0.01
LINC01006Q8NI28 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01006Q8NI28 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC01006Q8NI28 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01006Q8NI28 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01006Q8NI28 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AC112907.2-201ENST00000448639 330 ntBASIC15.01□□□□□ -0.01
LINC01006Q8NI28 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AL136038.3-201ENST00000561909 1096 ntBASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 AC007375.3-201ENST00000600936 2314 ntBASIC15.01□□□□□ -0.01
LINC01006Q8NI28 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms