Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SPTSSBQ8NFR3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 AC092296.2-201ENST00000589470 999 ntBASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 AC007029.1-201ENST00000604183 313 ntBASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms