Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 AL031963.3-201ENST00000606441 850 ntBASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 AC099398.1-201ENST00000567919 2776 ntBASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 AC008764.6-201ENST00000595909 2069 ntBASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC197Q8NCU1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CCDC197Q8NCU1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC197Q8NCU1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC197Q8NCU1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 AC105265.2-201ENST00000467189 838 ntBASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 PHGDH-210ENST00000641115 1638 ntBASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC197Q8NCU1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 AC010141.2-201ENST00000452426 721 ntBASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 MIR4767-201ENST00000582827 78 ntBASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 AC087633.2-202ENST00000565166 1439 ntBASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC197Q8NCU1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms