Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX5Q8N196 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SIX5Q8N196 CKBP1-201ENST00000565489 1086 ntBASIC19.76■□□□□ 0.75
SIX5Q8N196 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 NPAP1P7-201ENST00000613027 823 ntBASIC19.76■□□□□ 0.75
SIX5Q8N196 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.76■□□□□ 0.75
SIX5Q8N196 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
SIX5Q8N196 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
SIX5Q8N196 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.75■□□□□ 0.75
SIX5Q8N196 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SIX5Q8N196 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 PVRIG2P-201ENST00000435460 978 ntBASIC19.75■□□□□ 0.75
SIX5Q8N196 AP000347.1-202ENST00000435868 847 ntBASIC19.75■□□□□ 0.75
SIX5Q8N196 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX5Q8N196 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX5Q8N196 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.75■□□□□ 0.75
SIX5Q8N196 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.75■□□□□ 0.75
SIX5Q8N196 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.75■□□□□ 0.75
SIX5Q8N196 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX5Q8N196 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SIX5Q8N196 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.75■□□□□ 0.75
SIX5Q8N196 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SIX5Q8N196 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SIX5Q8N196 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
SIX5Q8N196 AC004870.1-201ENST00000315132 882 ntBASIC19.74■□□□□ 0.75
SIX5Q8N196 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SIX5Q8N196 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SIX5Q8N196 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.74■□□□□ 0.75
SIX5Q8N196 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SIX5Q8N196 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
SIX5Q8N196 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SIX5Q8N196 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
SIX5Q8N196 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SIX5Q8N196 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SIX5Q8N196 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.73■□□□□ 0.75
SIX5Q8N196 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX5Q8N196 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.73■□□□□ 0.75
SIX5Q8N196 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SIX5Q8N196 AC111152.3-201ENST00000569699 673 ntBASIC19.73■□□□□ 0.75
SIX5Q8N196 NEK4P2-201ENST00000580004 1012 ntBASIC19.73■□□□□ 0.75
SIX5Q8N196 AC092329.2-201ENST00000598402 547 ntBASIC19.73■□□□□ 0.75
SIX5Q8N196 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SIX5Q8N196 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SIX5Q8N196 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SIX5Q8N196 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SIX5Q8N196 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SIX5Q8N196 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIX5Q8N196 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.72■□□□□ 0.75
SIX5Q8N196 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SIX5Q8N196 SPDYE15P-201ENST00000424157 909 ntBASIC19.72■□□□□ 0.75
SIX5Q8N196 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.72■□□□□ 0.75
SIX5Q8N196 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.72■□□□□ 0.75
SIX5Q8N196 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIX5Q8N196 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SIX5Q8N196 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms