Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RBM17P1-201ENST00000453646 1190 ntBASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AC091390.4-202ENST00000476426 537 ntBASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 AC130371.2-201ENST00000619443 611 ntBASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf40Q8IXQ3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
C9orf40Q8IXQ3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
C9orf40Q8IXQ3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C9orf40Q8IXQ3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
C9orf40Q8IXQ3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 UNC93B2-201ENST00000285383 730 ntBASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 AC093484.2-201ENST00000580996 2166 ntBASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
C9orf40Q8IXQ3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 AC079598.2-202ENST00000546624 1451 ntBASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 AP000525.1-201ENST00000608286 694 ntBASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 DGCR10-201ENST00000609839 495 ntBASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf40Q8IXQ3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 AC007952.6-201ENST00000573168 2673 ntBASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 AC003957.1-201ENST00000625108 2673 ntBASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 FAM207BP-201ENST00000447172 505 ntBASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf40Q8IXQ3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms