Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 PRSS44-201ENST00000515154 1146 ntBASIC20■□□□□ 0.79
NPAS3Q8IXF0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 KRT8P11-201ENST00000409686 1436 ntBASIC20■□□□□ 0.79
NPAS3Q8IXF0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS3Q8IXF0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPAS3Q8IXF0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 AC005332.1-201ENST00000577698 1310 ntBASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS3Q8IXF0 AL691432.2-201ENST00000607222 2038 ntBASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 AC093458.2-201ENST00000623150 629 ntBASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 AC009237.14-201ENST00000609975 1594 ntBASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPAS3Q8IXF0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 KRT126P-201ENST00000549467 1181 ntBASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 AC116407.4-201ENST00000623319 1061 ntBASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS3Q8IXF0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 AC073314.1-201ENST00000568729 2216 ntBASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms