Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 UNC93B4-201ENST00000505679 747 ntBASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 AL121829.2-201ENST00000620908 328 ntBASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 SDHAP1-207ENST00000440850 2000 ntBASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 AL049812.1-201ENST00000432563 2267 ntBASIC17.07■□□□□ 0.32
LINC00346Q8IVM7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 AL161938.1-201ENST00000569833 2180 ntBASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00346Q8IVM7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 AC104417.2-201ENST00000562989 1793 ntBASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms