Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 AC130371.2-201ENST00000619443 611 ntBASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 AC079598.2-202ENST00000546624 1451 ntBASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 AC091390.4-202ENST00000476426 537 ntBASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 AP000525.1-201ENST00000608286 694 ntBASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRTM4Q86VH4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 FAM207BP-201ENST00000447172 505 ntBASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM4Q86VH4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 MMP23A-201ENST00000234610 1017 ntBASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 MIR1238-201ENST00000408483 83 ntBASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 AC008040.2-201ENST00000461049 708 ntBASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 AP000692.2-201ENST00000608391 879 ntBASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 KRT8P41-201ENST00000533985 1514 ntBASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM4Q86VH4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms