Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 AP001412.1-201ENST00000608405 714 ntBASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 AL135905.2-201ENST00000584934 1404 ntBASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP1BQ7LBR1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHMP1BQ7LBR1 AC120498.9-201ENST00000339021 3867 ntBASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 LETM1P2-201ENST00000597330 2178 ntBASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP1BQ7LBR1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP1BQ7LBR1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms