Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 TERF1P1-201ENST00000311003 1181 ntBASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 INGX-201ENST00000359239 846 ntBASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC128688.1-201ENST00000487626 519 ntBASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 LINC01521-201ENST00000504184 1943 ntBASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP1Q6WKZ4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP1Q6WKZ4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP1Q6WKZ4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 LIN28AP1-201ENST00000429574 405 ntBASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 AL049597.2-201ENST00000565575 961 ntBASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP1Q6WKZ4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC010203.1-204ENST00000548782 407 ntBASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC007952.6-201ENST00000573168 2673 ntBASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC112907.3-201ENST00000577781 2400 ntBASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC096733.2-201ENST00000609937 1394 ntBASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC003957.1-201ENST00000625108 2673 ntBASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RAB11FIP1Q6WKZ4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC073508.3-201ENST00000619697 1419 ntBASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 ATP5G1P1-201ENST00000448724 379 ntBASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP1Q6WKZ4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
RAB11FIP1Q6WKZ4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms