Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXR1Q6PIV2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FOXR1Q6PIV2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 RPS2P4-201ENST00000476944 856 ntBASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXR1Q6PIV2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 AL355472.2-201ENST00000422958 438 ntBASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 UNC93B4-201ENST00000505679 747 ntBASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXR1Q6PIV2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms