Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 ECEL1P3-201ENST00000427961 737 ntBASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC39AQ5SRH9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 CRYGFP-201ENST00000418459 633 ntBASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TTC39AQ5SRH9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
TTC39AQ5SRH9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC39AQ5SRH9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC39AQ5SRH9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 AP005242.2-201ENST00000580065 1175 ntBASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 LINC01023-201ENST00000606054 436 ntBASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 CYP2D8P-201ENST00000433633 1490 ntBASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 AL158211.5-201ENST00000623583 2518 ntBASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 SDHAP1-207ENST00000440850 2000 ntBASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39AQ5SRH9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.48■■□□□ 1.35
TTC39AQ5SRH9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms