Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 AL162430.1-201ENST00000480705 870 ntBASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 RARRES2P6-201ENST00000567333 442 ntBASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 Z98044.1-201ENST00000632503 1764 ntBASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 AF201337.1-201ENST00000520239 748 ntBASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 AC105036.2-201ENST00000569468 176 ntBASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 AC124283.5-201ENST00000624661 1809 ntBASIC18.21■□□□□ 0.51
RUNDC3AQ59EK9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RUNDC3AQ59EK9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RUNDC3AQ59EK9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.21■□□□□ 0.5
RUNDC3AQ59EK9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 AC022517.1-201ENST00000592429 346 ntBASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 AL050303.2-201ENST00000619798 666 ntBASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 IRX1P1-201ENST00000438849 1838 ntBASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 WIZP1-201ENST00000531444 2299 ntBASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RUNDC3AQ59EK9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.19■□□□□ 0.5
RUNDC3AQ59EK9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms