Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EFNB3Q15768 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EFNB3Q15768 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EFNB3Q15768 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EFNB3Q15768 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.46■□□□□ 0.23
EFNB3Q15768 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.46■□□□□ 0.23
EFNB3Q15768 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EFNB3Q15768 AC113347.1-201ENST00000413321 391 ntBASIC16.46■□□□□ 0.23
EFNB3Q15768 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 AC128688.1-201ENST00000487626 519 ntBASIC16.46■□□□□ 0.23
EFNB3Q15768 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.46■□□□□ 0.23
EFNB3Q15768 KRT18P21-201ENST00000515767 1272 ntBASIC16.46■□□□□ 0.23
EFNB3Q15768 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
EFNB3Q15768 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.46■□□□□ 0.23
EFNB3Q15768 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.46■□□□□ 0.23
EFNB3Q15768 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
EFNB3Q15768 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.46■□□□□ 0.23
EFNB3Q15768 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
EFNB3Q15768 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
EFNB3Q15768 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
EFNB3Q15768 KRT8P41-201ENST00000533985 1514 ntBASIC16.45■□□□□ 0.22
EFNB3Q15768 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.45■□□□□ 0.22
EFNB3Q15768 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
EFNB3Q15768 SLC25A1P2-201ENST00000430693 912 ntBASIC16.45■□□□□ 0.22
EFNB3Q15768 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.45■□□□□ 0.22
EFNB3Q15768 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.45■□□□□ 0.22
EFNB3Q15768 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.45■□□□□ 0.22
EFNB3Q15768 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.45■□□□□ 0.22
EFNB3Q15768 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.45■□□□□ 0.22
EFNB3Q15768 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.45■□□□□ 0.22
EFNB3Q15768 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.45■□□□□ 0.22
EFNB3Q15768 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.45■□□□□ 0.22
EFNB3Q15768 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
EFNB3Q15768 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.45■□□□□ 0.22
EFNB3Q15768 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
EFNB3Q15768 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
EFNB3Q15768 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.44■□□□□ 0.22
EFNB3Q15768 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.44■□□□□ 0.22
EFNB3Q15768 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 SLC25A3P1-201ENST00000443844 931 ntBASIC16.44■□□□□ 0.22
EFNB3Q15768 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.44■□□□□ 0.22
EFNB3Q15768 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
EFNB3Q15768 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
EFNB3Q15768 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.44■□□□□ 0.22
EFNB3Q15768 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 AC092865.7-201ENST00000641832 219 ntBASIC16.44■□□□□ 0.22
EFNB3Q15768 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.44■□□□□ 0.22
EFNB3Q15768 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
EFNB3Q15768 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
EFNB3Q15768 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFNB3Q15768 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
EFNB3Q15768 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.43■□□□□ 0.22
EFNB3Q15768 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms