Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.742e-6■■□□□ 12.6
SRSF1Q07955 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.862e-6■■□□□ 12.6
SRSF1Q07955 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.862e-6■■□□□ 12.6
SRSF1Q07955 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.72□□□□□ -0.375e-7■■□□□ 12.6
SRSF1Q07955 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.5□□□□□ -0.415e-7■■□□□ 12.6
SRSF1Q07955 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC11.76□□□□□ -0.535e-7■■□□□ 12.6
SRSF1Q07955 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC10.41□□□□□ -0.745e-7■■□□□ 12.6
SRSF1Q07955 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.895e-7■■□□□ 12.6
SRSF1Q07955 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)9.1□□□□□ -0.955e-7■■□□□ 12.6
SRSF1Q07955 HNRNPH1-221ENST00000513230 248 ntTSL 319.74■□□□□ 0.751e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-238ENST00000521116 806 ntTSL 418.9■□□□□ 0.621e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-228ENST00000515714 690 ntTSL 417.91■□□□□ 0.461e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-212ENST00000505087 592 ntTSL 317.1■□□□□ 0.331e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-245ENST00000523137 1563 ntTSL 416■□□□□ 0.151e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-225ENST00000515158 850 ntTSL 415.92■□□□□ 0.141e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.59■□□□□ 0.091e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-208ENST00000503664 569 ntTSL 415.59■□□□□ 0.091e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-242ENST00000522256 492 ntTSL 414.43□□□□□ -0.11e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-226ENST00000515446 368 ntTSL 214.27□□□□□ -0.131e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-213ENST00000505811 1155 ntTSL 513.93□□□□□ -0.181e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-209ENST00000504348 594 ntTSL 413.44□□□□□ -0.261e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-215ENST00000508103 610 ntTSL 213.32□□□□□ -0.281e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-249ENST00000524180 997 ntTSL 513□□□□□ -0.331e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-220ENST00000513225 805 ntTSL 412.92□□□□□ -0.341e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-214ENST00000506721 602 ntTSL 512.57□□□□□ -0.41e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-233ENST00000519455 451 ntTSL 412.49□□□□□ -0.411e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-217ENST00000510431 620 ntTSL 212.38□□□□□ -0.431e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-234ENST00000519707 582 ntTSL 212.38□□□□□ -0.431e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-232ENST00000519056 530 ntTSL 412.25□□□□□ -0.451e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-222ENST00000513972 761 ntTSL 211.8□□□□□ -0.521e-61■■□□□ 12.6
SRSF1Q07955 HNRNPH1-219ENST00000512273 501 ntTSL 49.07□□□□□ -0.961e-61■■□□□ 12.6
SRSF1Q07955 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)16.94■□□□□ 0.32e-6■■□□□ 12.6
SRSF1Q07955 MLLT6-201ENST00000611305 483 ntTSL 215.28■□□□□ 0.042e-6■■□□□ 12.6
SRSF1Q07955 RAB17-209ENST00000466244 937 ntTSL 213.84□□□□□ -0.194e-8■■□□□ 12.6
SRSF1Q07955 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.442e-6■■□□□ 12.6
SRSF1Q07955 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.452e-6■■□□□ 12.6
SRSF1Q07955 MLLT6-203ENST00000614769 657 ntTSL 29.62□□□□□ -0.872e-6■■□□□ 12.6
SRSF1Q07955 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-9■■□□□ 12.6
SRSF1Q07955 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.022e-9■■□□□ 12.6
SRSF1Q07955 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.052e-9■■□□□ 12.6
SRSF1Q07955 RPS10-NUDT3-201ENST00000605528 595 ntTSL 57.89□□□□□ -1.152e-9■■□□□ 12.6
SRSF1Q07955 SUGP2-212ENST00000598863 551 ntTSL 313.16□□□□□ -0.32e-10■■□□□ 12.6
SRSF1Q07955 SUGP2-207ENST00000597095 536 ntTSL 26.9□□□□□ -1.32e-10■■□□□ 12.6
SRSF1Q07955 SUGP2-208ENST00000597163 423 ntTSL 33.17□□□□□ -1.92e-10■■□□□ 12.6
SRSF1Q07955 EHMT2-208ENST00000465429 1454 ntTSL 223.43■■□□□ 1.343e-6■■□□□ 12.5
SRSF1Q07955 DGCR8-204ENST00000457069 770 ntTSL 318.99■□□□□ 0.633e-6■■□□□ 12.5
SRSF1Q07955 MSH5-215ENST00000482280 944 ntTSL 218.72■□□□□ 0.595e-12■■□□□ 12.5
SRSF1Q07955 DNMT1-227ENST00000592342 636 ntTSL 318.67■□□□□ 0.583e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-219ENST00000569975 561 ntTSL 418.13■□□□□ 0.497e-9■■□□□ 12.5
SRSF1Q07955 AP1G1-205ENST00000563104 882 ntTSL 417.76■□□□□ 0.437e-9■■□□□ 12.5
SRSF1Q07955 DNMT1-216ENST00000588952 841 ntTSL 517.7■□□□□ 0.423e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-210ENST00000565412 619 ntTSL 317.66■□□□□ 0.427e-9■■□□□ 12.5
SRSF1Q07955 AP1G1-214ENST00000567583 606 ntTSL 217.48■□□□□ 0.397e-9■■□□□ 12.5
SRSF1Q07955 MSH5-207ENST00000425703 694 ntTSL 517.24■□□□□ 0.355e-12■■□□□ 12.5
SRSF1Q07955 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.323e-6■■□□□ 12.5
SRSF1Q07955 ZNF692-207ENST00000468455 644 ntTSL 516.96■□□□□ 0.313e-6■■□□□ 12.5
SRSF1Q07955 LAMA5-202ENST00000370677 1674 ntTSL 216.94■□□□□ 0.33e-6■■□□□ 12.5
SRSF1Q07955 ZNF76-205ENST00000469195 1373 ntTSL 516.88■□□□□ 0.293e-6■■□□□ 12.5
SRSF1Q07955 ZNF76-209ENST00000486891 1654 ntTSL 216.65■□□□□ 0.263e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-215ENST00000568327 1724 ntTSL 516.44■□□□□ 0.227e-9■■□□□ 12.5
SRSF1Q07955 SLC38A10-206ENST00000540966 896 ntTSL 316.3■□□□□ 0.23e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-206ENST00000563259 844 ntTSL 415.69■□□□□ 0.17e-9■■□□□ 12.5
SRSF1Q07955 MIGA2-208ENST00000474639 585 ntTSL 415.36■□□□□ 0.053e-6■■□□□ 12.5
SRSF1Q07955 PDAP1-202ENST00000426447 767 ntTSL 514.92□□□□□ -0.021e-7■■□□□ 12.5
SRSF1Q07955 KLHDC4-208ENST00000562261 1065 ntTSL 314.9□□□□□ -0.023e-6■■□□□ 12.5
SRSF1Q07955 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.49□□□□□ -0.093e-6■■□□□ 12.5
SRSF1Q07955 SLC38A10-203ENST00000539643 1988 ntTSL 1 (best)14.44□□□□□ -0.13e-6■■□□□ 12.5
SRSF1Q07955 KLHDC4-212ENST00000564396 563 ntTSL 514.27□□□□□ -0.133e-6■■□□□ 12.5
SRSF1Q07955 MIGA2-202ENST00000414342 574 ntTSL 514.22□□□□□ -0.133e-6■■□□□ 12.5
SRSF1Q07955 KLHDC4-214ENST00000565328 582 ntTSL 413.78□□□□□ -0.23e-6■■□□□ 12.5
SRSF1Q07955 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.78□□□□□ -0.25e-12■■□□□ 12.5
SRSF1Q07955 MIGA2-206ENST00000471943 567 ntTSL 413.62□□□□□ -0.233e-6■■□□□ 12.5
SRSF1Q07955 PDAP1-204ENST00000496335 302 ntTSL 313.6□□□□□ -0.231e-7■■□□□ 12.5
SRSF1Q07955 KLHDC4-217ENST00000566661 2232 ntTSL 513.45□□□□□ -0.263e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-217ENST00000569185 559 ntTSL 313.42□□□□□ -0.267e-9■■□□□ 12.5
SRSF1Q07955 KLHDC4-226ENST00000569747 560 ntTSL 413.21□□□□□ -0.293e-6■■□□□ 12.5
SRSF1Q07955 ATG16L2-218ENST00000542481 571 ntTSL 513.18□□□□□ -0.37e-9■■□□□ 12.5
SRSF1Q07955 KLHDC4-224ENST00000568502 546 ntTSL 413.07□□□□□ -0.323e-6■■□□□ 12.5
SRSF1Q07955 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.411e-7■■□□□ 12.5
SRSF1Q07955 SNHG1-216ENST00000541416 996 ntTSL 212.33□□□□□ -0.445e-12■■□□□ 12.5
SRSF1Q07955 ZNF76-210ENST00000491400 1476 ntTSL 212.19□□□□□ -0.463e-6■■□□□ 12.5
SRSF1Q07955 ZNF76-204ENST00000460229 697 ntTSL 312.09□□□□□ -0.473e-6■■□□□ 12.5
SRSF1Q07955 ZNF3-209ENST00000441298 574 ntTSL 412.02□□□□□ -0.492e-11■■□□□ 12.5
SRSF1Q07955 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.53e-6■■□□□ 12.5
SRSF1Q07955 DNMT1-214ENST00000588118 973 ntTSL 511.44□□□□□ -0.583e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-212ENST00000566161 989 ntTSL 411.33□□□□□ -0.67e-9■■□□□ 12.5
SRSF1Q07955 ZNF3-204ENST00000412947 595 ntTSL 1 (best)11.31□□□□□ -0.62e-11■■□□□ 12.5
SRSF1Q07955 ZNF3-210ENST00000449785 735 ntTSL 311.31□□□□□ -0.62e-11■■□□□ 12.5
SRSF1Q07955 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.623e-6■■□□□ 12.5
SRSF1Q07955 ZNF3-206ENST00000415068 543 ntTSL 1 (best)11.11□□□□□ -0.632e-11■■□□□ 12.5
SRSF1Q07955 TTN-AS1-270ENST00000630096 915 ntTSL 5 BASIC11.11□□□□□ -0.637e-9■■□□□ 12.5
SRSF1Q07955 MIGA2-203ENST00000439290 4345 ntTSL 211.04□□□□□ -0.643e-6■■□□□ 12.5
SRSF1Q07955 AP1G1-222ENST00000570297 604 ntTSL 410.72□□□□□ -0.697e-9■■□□□ 12.5
SRSF1Q07955 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC10.68□□□□□ -0.77e-8■■□□□ 12.5
SRSF1Q07955 VCP-207ENST00000493886 2942 ntTSL 210.61□□□□□ -0.713e-6■■□□□ 12.5
SRSF1Q07955 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.723e-6■■□□□ 12.5
SRSF1Q07955 ZNF3-214ENST00000485892 722 ntTSL 210.56□□□□□ -0.722e-11■■□□□ 12.5
SRSF1Q07955 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC10.54□□□□□ -0.727e-9■■□□□ 12.5
SRSF1Q07955 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC10.49□□□□□ -0.735e-12■■□□□ 12.5
SRSF1Q07955 SNHG1-221ENST00000544983 870 ntTSL 210.47□□□□□ -0.735e-12■■□□□ 12.5
Retrieved 100 of 14,836 protein–RNA pairs in 183.3 ms