Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS1BP61024 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS1BP61024 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 AC138907.5-202ENST00000569484 235 ntBASIC13.49□□□□□ -0.25
CKS1BP61024 RARRES2P11-201ENST00000635158 484 ntBASIC13.49□□□□□ -0.25
CKS1BP61024 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CKS1BP61024 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CKS1BP61024 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS1BP61024 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS1BP61024 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS1BP61024 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 MIR939-201ENST00000401314 82 ntBASIC13.48□□□□□ -0.25
CKS1BP61024 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS1BP61024 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CKS1BP61024 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS1BP61024 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.47□□□□□ -0.25
CKS1BP61024 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS1BP61024 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 TPRG1LP1-201ENST00000598702 760 ntBASIC13.47□□□□□ -0.25
CKS1BP61024 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS1BP61024 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CKS1BP61024 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms