Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.92■□□□□ 0.78
EIF3EP60228 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.92■□□□□ 0.78
EIF3EP60228 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.92■□□□□ 0.78
EIF3EP60228 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.91■□□□□ 0.78
EIF3EP60228 HLA-L-209ENST00000420110 1011 ntBASIC19.91■□□□□ 0.78
EIF3EP60228 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
EIF3EP60228 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
EIF3EP60228 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
EIF3EP60228 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
EIF3EP60228 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.91■□□□□ 0.78
EIF3EP60228 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
EIF3EP60228 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
EIF3EP60228 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
EIF3EP60228 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.9■□□□□ 0.78
EIF3EP60228 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.9■□□□□ 0.78
EIF3EP60228 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EIF3EP60228 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.89■□□□□ 0.77
EIF3EP60228 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.89■□□□□ 0.77
EIF3EP60228 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
EIF3EP60228 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
EIF3EP60228 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
EIF3EP60228 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.89■□□□□ 0.77
EIF3EP60228 POM121L13P-201ENST00000422362 380 ntBASIC19.89■□□□□ 0.77
EIF3EP60228 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.89■□□□□ 0.77
EIF3EP60228 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.89■□□□□ 0.77
EIF3EP60228 UNC93B5-201ENST00000530315 699 ntBASIC19.89■□□□□ 0.77
EIF3EP60228 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
EIF3EP60228 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
EIF3EP60228 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.89■□□□□ 0.77
EIF3EP60228 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.89■□□□□ 0.77
EIF3EP60228 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
EIF3EP60228 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EIF3EP60228 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3EP60228 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3EP60228 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
EIF3EP60228 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EIF3EP60228 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3EP60228 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms