Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
WNT3AP56704 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.52■□□□□ 0.72
WNT3AP56704 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.52■□□□□ 0.72
WNT3AP56704 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.52■□□□□ 0.71
WNT3AP56704 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
WNT3AP56704 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.52■□□□□ 0.71
WNT3AP56704 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
WNT3AP56704 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
WNT3AP56704 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.51■□□□□ 0.71
WNT3AP56704 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.51■□□□□ 0.71
WNT3AP56704 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.51■□□□□ 0.71
WNT3AP56704 FAM197Y4-202ENST00000622692 608 ntBASIC19.51■□□□□ 0.71
WNT3AP56704 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.51■□□□□ 0.71
WNT3AP56704 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
WNT3AP56704 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.51■□□□□ 0.71
WNT3AP56704 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
WNT3AP56704 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
WNT3AP56704 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.5■□□□□ 0.71
WNT3AP56704 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.5■□□□□ 0.71
WNT3AP56704 AC098590.1-201ENST00000468126 897 ntBASIC19.5■□□□□ 0.71
WNT3AP56704 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
WNT3AP56704 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 AL160286.2-201ENST00000567150 934 ntBASIC19.5■□□□□ 0.71
WNT3AP56704 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.5■□□□□ 0.71
WNT3AP56704 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
WNT3AP56704 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.5■□□□□ 0.71
WNT3AP56704 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.5■□□□□ 0.71
WNT3AP56704 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
WNT3AP56704 HTR7P1-201ENST00000538670 1336 ntBASIC19.5■□□□□ 0.71
WNT3AP56704 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 AC141586.3-201ENST00000562166 1838 ntBASIC19.49■□□□□ 0.71
WNT3AP56704 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
WNT3AP56704 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
WNT3AP56704 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
WNT3AP56704 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.49■□□□□ 0.71
WNT3AP56704 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
WNT3AP56704 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
WNT3AP56704 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.48■□□□□ 0.71
WNT3AP56704 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.48■□□□□ 0.71
WNT3AP56704 AC142381.4-202ENST00000563973 229 ntBASIC19.48■□□□□ 0.71
WNT3AP56704 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.48■□□□□ 0.71
WNT3AP56704 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.48■□□□□ 0.71
WNT3AP56704 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.48■□□□□ 0.71
WNT3AP56704 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.48■□□□□ 0.71
WNT3AP56704 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
WNT3AP56704 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms