Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC25A1P53007 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC25A1P53007 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 IRX1P1-201ENST00000438849 1838 ntBASIC17.16■□□□□ 0.34
SLC25A1P53007 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC25A1P53007 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SLC25A1P53007 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC25A1P53007 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC25A1P53007 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC25A1P53007 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC25A1P53007 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC25A1P53007 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
SLC25A1P53007 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC25A1P53007 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC25A1P53007 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC25A1P53007 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLC25A1P53007 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC25A1P53007 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC25A1P53007 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLC25A1P53007 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
SLC25A1P53007 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC25A1P53007 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC25A1P53007 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SLC25A1P53007 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC25A1P53007 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC25A1P53007 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC25A1P53007 AC083880.1-201ENST00000608266 535 ntBASIC17.14■□□□□ 0.33
SLC25A1P53007 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC25A1P53007 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC25A1P53007 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 AL031598.1-201ENST00000561511 1773 ntBASIC17.14■□□□□ 0.33
SLC25A1P53007 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC25A1P53007 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC25A1P53007 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.14■□□□□ 0.33
SLC25A1P53007 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC25A1P53007 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SLC25A1P53007 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC25A1P53007 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC25A1P53007 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC25A1P53007 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC25A1P53007 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC25A1P53007 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC25A1P53007 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC25A1P53007 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.13■□□□□ 0.33
SLC25A1P53007 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC25A1P53007 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC25A1P53007 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC25A1P53007 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC25A1P53007 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms