Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.61■□□□□ 0.57
ERFP50548 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.61■□□□□ 0.57
ERFP50548 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.61■□□□□ 0.57
ERFP50548 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERFP50548 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.61■□□□□ 0.57
ERFP50548 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.61■□□□□ 0.57
ERFP50548 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.61■□□□□ 0.57
ERFP50548 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.61■□□□□ 0.57
ERFP50548 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.61■□□□□ 0.57
ERFP50548 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ERFP50548 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERFP50548 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERFP50548 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERFP50548 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.6■□□□□ 0.57
ERFP50548 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
ERFP50548 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.6■□□□□ 0.57
ERFP50548 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.6■□□□□ 0.57
ERFP50548 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.6■□□□□ 0.57
ERFP50548 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.6■□□□□ 0.57
ERFP50548 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.6■□□□□ 0.57
ERFP50548 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERFP50548 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.6■□□□□ 0.57
ERFP50548 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERFP50548 PTBP1P-201ENST00000554374 1601 ntBASIC18.6■□□□□ 0.57
ERFP50548 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 AC079598.2-202ENST00000546624 1451 ntBASIC18.59■□□□□ 0.57
ERFP50548 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ERFP50548 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.59■□□□□ 0.57
ERFP50548 AC010141.2-201ENST00000452426 721 ntBASIC18.59■□□□□ 0.57
ERFP50548 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERFP50548 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
ERFP50548 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ERFP50548 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.58■□□□□ 0.57
ERFP50548 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ERFP50548 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ERFP50548 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.58■□□□□ 0.57
ERFP50548 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ERFP50548 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ERFP50548 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
ERFP50548 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 AC105265.2-201ENST00000467189 838 ntBASIC18.58■□□□□ 0.56
ERFP50548 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.58■□□□□ 0.56
ERFP50548 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.58■□□□□ 0.56
ERFP50548 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.58■□□□□ 0.56
ERFP50548 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.58■□□□□ 0.56
ERFP50548 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ERFP50548 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERFP50548 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
ERFP50548 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERFP50548 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ERFP50548 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERFP50548 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ERFP50548 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms