Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC142086.2-201ENST00000569753 217 ntBASIC16.96■□□□□ 0.31
CX3CR1P49238 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 AC008687.6-201ENST00000596318 630 ntBASIC16.96■□□□□ 0.31
CX3CR1P49238 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.96■□□□□ 0.31
CX3CR1P49238 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.96■□□□□ 0.31
CX3CR1P49238 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.96■□□□□ 0.31
CX3CR1P49238 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CR1P49238 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CX3CR1P49238 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.96■□□□□ 0.3
CX3CR1P49238 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CX3CR1P49238 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
CX3CR1P49238 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.96■□□□□ 0.3
CX3CR1P49238 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.95■□□□□ 0.3
CX3CR1P49238 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CX3CR1P49238 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
CX3CR1P49238 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CX3CR1P49238 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.95■□□□□ 0.3
CX3CR1P49238 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.95■□□□□ 0.3
CX3CR1P49238 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.95■□□□□ 0.3
CX3CR1P49238 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.95■□□□□ 0.3
CX3CR1P49238 LINC01465-201ENST00000408887 1940 ntBASIC16.95■□□□□ 0.3
CX3CR1P49238 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CR1P49238 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CX3CR1P49238 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.95■□□□□ 0.3
CX3CR1P49238 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CX3CR1P49238 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CX3CR1P49238 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CX3CR1P49238 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.94■□□□□ 0.3
CX3CR1P49238 AL355802.2-201ENST00000402069 882 ntBASIC16.94■□□□□ 0.3
CX3CR1P49238 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CX3CR1P49238 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CX3CR1P49238 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CX3CR1P49238 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.94■□□□□ 0.3
CX3CR1P49238 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CR1P49238 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CX3CR1P49238 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CR1P49238 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.93■□□□□ 0.3
CX3CR1P49238 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CX3CR1P49238 AL121829.2-201ENST00000620908 328 ntBASIC16.93■□□□□ 0.3
CX3CR1P49238 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 KRT8P8-201ENST00000434750 1448 ntBASIC16.93■□□□□ 0.3
CX3CR1P49238 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CX3CR1P49238 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CR1P49238 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CX3CR1P49238 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms