Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.04■□□□□ 0.83e-10■■■■□ 20
MATR3P43243 PTTG1IP-207ENST00000494690 612 ntTSL 513.42□□□□□ -0.263e-10■■■■□ 20
MATR3P43243 ATL2-213ENST00000474535 597 ntTSL 33.43□□□□□ -1.863e-6■■■■□ 20
MATR3P43243 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.89■■□□□ 1.411e-7■■■■□ 20
MATR3P43243 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.17■□□□□ 0.981e-7■■■■□ 20
MATR3P43243 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.971e-7■■■■□ 20
MATR3P43243 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.5■□□□□ 0.551e-7■■■■□ 20
MATR3P43243 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.1■□□□□ 0.491e-7■■■■□ 20
MATR3P43243 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.95■□□□□ 0.461e-7■■■■□ 20
MATR3P43243 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.351e-7■■■■□ 20
MATR3P43243 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.28■□□□□ 0.21e-7■■■■□ 20
MATR3P43243 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC13.44□□□□□ -0.261e-7■■■■□ 20
MATR3P43243 SEPT8-213ENST00000481030 790 ntTSL 312.3□□□□□ -0.441e-7■■■■□ 20
MATR3P43243 DENND4A-208ENST00000568515 2655 ntTSL 223.96■■□□□ 1.431e-6■■■■□ 20
MATR3P43243 DENND4A-206ENST00000564674 3389 ntTSL 1 (best)20.83■□□□□ 0.931e-6■■■■□ 20
MATR3P43243 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.441e-6■■■■□ 20
MATR3P43243 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.91□□□□□ -1.941e-6■■■■□ 20
MATR3P43243 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.82□□□□□ -11e-6■■■■□ 20
MATR3P43243 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.74e-7■■■■□ 20
MATR3P43243 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.734e-7■■■■□ 20
MATR3P43243 PTPRK-211ENST00000429595 558 ntTSL 36.41□□□□□ -1.381e-6■■■■□ 20
MATR3P43243 PTPRK-213ENST00000490332 612 ntTSL 55.43□□□□□ -1.541e-6■■■■□ 20
MATR3P43243 KDM4C-206ENST00000438023 4022 ntTSL 515.58■□□□□ 0.082e-6■■■■□ 20
MATR3P43243 AL645568.1-201ENST00000367716 1815 ntTSL 1 (best) BASIC12.78□□□□□ -0.362e-6■■■■□ 20
MATR3P43243 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.862e-7■■■■□ 20
MATR3P43243 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.472e-7■■■■□ 20
MATR3P43243 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.73□□□□□ -0.211e-7■■■■□ 20
MATR3P43243 UQCC1-219ENST00000491125 990 ntTSL 517.29■□□□□ 0.369e-7■■■■□ 20
MATR3P43243 UQCC1-220ENST00000495752 410 ntTSL 510.79□□□□□ -0.689e-7■■■■□ 20
MATR3P43243 UQCC1-207ENST00000397553 566 ntTSL 59.53□□□□□ -0.889e-7■■■■□ 20
MATR3P43243 UQCC1-218ENST00000491040 1017 ntTSL 1 (best)9.43□□□□□ -0.99e-7■■■■□ 20
MATR3P43243 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.27□□□□□ -1.259e-7■■■■□ 20
MATR3P43243 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.192e-6■■■■□ 20
MATR3P43243 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.412e-6■■■■□ 19.9
MATR3P43243 MTG1-204ENST00000473735 2212 ntTSL 523.42■■□□□ 1.345e-7■■■■□ 19.9
MATR3P43243 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.825e-7■■■■□ 19.9
MATR3P43243 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.76■□□□□ 0.755e-7■■■■□ 19.9
MATR3P43243 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.645e-7■■■■□ 19.9
MATR3P43243 MTG1-202ENST00000432508 953 ntTSL 218.31■□□□□ 0.525e-7■■■■□ 19.9
MATR3P43243 MTG1-203ENST00000460848 2730 ntTSL 215.69■□□□□ 0.15e-7■■■■□ 19.9
MATR3P43243 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.987e-7■■■■□ 19.9
MATR3P43243 JAK2-204ENST00000636127 2615 ntTSL 516.18■□□□□ 0.187e-7■■■■□ 19.9
MATR3P43243 ZNF782-202ENST00000430274 562 ntTSL 329.81■■■□□ 2.362e-6■■■■□ 19.9
MATR3P43243 ZNF782-204ENST00000478850 932 ntTSL 526.59■■□□□ 1.852e-6■■■■□ 19.9
MATR3P43243 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■■■□ 19.9
MATR3P43243 ZNF782-203ENST00000466833 628 ntTSL 313.03□□□□□ -0.322e-6■■■■□ 19.9
MATR3P43243 ZNF782-207ENST00000498811 698 ntTSL 311.72□□□□□ -0.532e-6■■■■□ 19.9
MATR3P43243 ZNF782-201ENST00000289032 2355 ntTSL 26.55□□□□□ -1.362e-6■■■■□ 19.9
MATR3P43243 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.52e-6■■■■□ 19.9
MATR3P43243 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.97□□□□□ -1.614e-6■■■■□ 19.9
MATR3P43243 SAMD5-202ENST00000566741 393 ntTSL 36□□□□□ -1.451e-6■■■■□ 19.9
MATR3P43243 AL033504.1-202ENST00000432506 406 ntTSL 23.42□□□□□ -1.861e-6■■■■□ 19.9
MATR3P43243 GMDS-AS1-216ENST00000607519 579 ntTSL 411.49□□□□□ -0.573e-7■■■■□ 19.9
MATR3P43243 PRR4-202ENST00000534923 533 ntTSL 23.29□□□□□ -1.882e-6■■■■□ 19.9
MATR3P43243 JAK2-202ENST00000476574 327 ntTSL 312.84□□□□□ -0.354e-7■■■■□ 19.9
MATR3P43243 SRP54-AS1-205ENST00000636540 565 ntBASIC12.12□□□□□ -0.472e-6■■■■□ 19.9
MATR3P43243 AC007388.1-203ENST00000422128 596 ntTSL 422.24■■□□□ 1.154e-8■■■■□ 19.9
MATR3P43243 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.91■□□□□ 0.144e-8■■■■□ 19.9
MATR3P43243 AC007388.1-207ENST00000446698 593 ntTSL 513.81□□□□□ -0.24e-8■■■■□ 19.9
MATR3P43243 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.36□□□□□ -1.074e-8■■■■□ 19.9
MATR3P43243 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.71■□□□□ 0.271e-6■■■■□ 19.9
MATR3P43243 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.151e-6■■■■□ 19.9
MATR3P43243 MIIP-203ENST00000466860 1709 ntTSL 519.12■□□□□ 0.656e-7■■■■□ 19.9
MATR3P43243 MIIP-207ENST00000498685 1392 ntTSL 219.07■□□□□ 0.646e-7■■■■□ 19.9
MATR3P43243 MIIP-205ENST00000478749 779 ntTSL 216.65■□□□□ 0.266e-7■■■■□ 19.9
MATR3P43243 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.246e-7■■■■□ 19.9
MATR3P43243 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.08■□□□□ 0.642e-6■■■■□ 19.9
MATR3P43243 STK24-207ENST00000491878 547 ntTSL 416.19■□□□□ 0.182e-6■■■■□ 19.9
MATR3P43243 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.362e-6■■■■□ 19.9
MATR3P43243 EHBP1-204ENST00000405482 1311 ntTSL 224.69■■□□□ 1.546e-7■■■■□ 19.9
MATR3P43243 EHBP1-205ENST00000413434 533 ntTSL 410.6□□□□□ -0.716e-7■■■■□ 19.9
MATR3P43243 EHBP1-211ENST00000449820 539 ntTSL 59.83□□□□□ -0.846e-7■■■■□ 19.9
MATR3P43243 EHBP1-207ENST00000426940 586 ntTSL 48.51□□□□□ -1.056e-7■■■■□ 19.9
MATR3P43243 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5□□□□□ -1.616e-7■■■■□ 19.9
MATR3P43243 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.841e-8■■■■□ 19.9
MATR3P43243 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.231e-8■■■■□ 19.9
MATR3P43243 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.241e-8■■■■□ 19.9
MATR3P43243 SPC25-204ENST00000479309 510 ntTSL 52.52□□□□□ -2.019e-11■■■■□ 19.9
MATR3P43243 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.93□□□□□ -1.33e-6■■■■□ 19.9
MATR3P43243 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)7.97□□□□□ -1.135e-7■■■■□ 19.9
MATR3P43243 ATXN1-208ENST00000492857 647 ntTSL 45.15□□□□□ -1.595e-7■■■■□ 19.9
MATR3P43243 MORF4L2-204ENST00000422355 562 ntTSL 210.72□□□□□ -0.696e-7■■■■□ 19.9
MATR3P43243 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.96e-7■■■■□ 19.9
MATR3P43243 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.936e-7■■■■□ 19.9
MATR3P43243 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.046e-7■■■■□ 19.9
MATR3P43243 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.056e-7■■■■□ 19.9
MATR3P43243 MORF4L2-209ENST00000442614 869 ntTSL 28.47□□□□□ -1.056e-7■■■■□ 19.9
MATR3P43243 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.066e-7■■■■□ 19.9
MATR3P43243 MORF4L2-207ENST00000434230 899 ntTSL 27.87□□□□□ -1.156e-7■■■■□ 19.9
MATR3P43243 MORF4L2-215ENST00000498064 451 ntTSL 27.72□□□□□ -1.176e-7■■■■□ 19.9
MATR3P43243 MORF4L2-214ENST00000492116 582 ntTSL 26.35□□□□□ -1.396e-7■■■■□ 19.9
MATR3P43243 MORF4L2-202ENST00000418819 849 ntTSL 35.45□□□□□ -1.546e-7■■■■□ 19.9
MATR3P43243 MORF4L2-211ENST00000467755 370 ntTSL 1 (best)5.14□□□□□ -1.596e-7■■■■□ 19.9
MATR3P43243 MORF4L2-212ENST00000474653 573 ntTSL 24.15□□□□□ -1.756e-7■■■■□ 19.9
MATR3P43243 WWOX-215ENST00000569332 1856 ntTSL 226■■□□□ 1.758e-7■■■■□ 19.9
MATR3P43243 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.36■■□□□ 1.018e-7■■■■□ 19.9
MATR3P43243 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.18■□□□□ 0.988e-7■■■■□ 19.9
MATR3P43243 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.848e-7■■■■□ 19.9
MATR3P43243 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.73■□□□□ 0.758e-7■■■■□ 19.9
MATR3P43243 EEA1-205ENST00000553019 558 ntTSL 520.61■□□□□ 0.894e-10■■■■□ 19.9
Retrieved 100 of 16,209 protein–RNA pairs in 65 ms