RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
PTPRK-211ENST00000429595 CHIC1Q5VXU3 224 aa33.35■■■□□ 2.93
PTPRK-211ENST00000429595 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
PTPRK-211ENST00000429595 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
PTPRK-211ENST00000429595 FOXD1Q16676 465 aa27.79■■■□□ 2.04
PTPRK-211ENST00000429595 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
PTPRK-211ENST00000429595 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
PTPRK-211ENST00000429595 ADRA2BP18089 450 aa26.03■■□□□ 1.76
PTPRK-211ENST00000429595 PIAS4Q8N2W9 510 aaPredicted RBP25.95■■□□□ 1.74
PTPRK-211ENST00000429595 MSH5O43196 834 aa25.85■■□□□ 1.73
PTPRK-211ENST00000429595 POTEDQ86YR6 584 aa25.08■■□□□ 1.61
PTPRK-211ENST00000429595 MAPK8IP2Q13387 824 aaPredicted RBP23.88■■□□□ 1.41
PTPRK-211ENST00000429595 SCAF1Q9H7N4 1312 aaKnown RBP23.67■■□□□ 1.38
PTPRK-211ENST00000429595 DMRT2Q9Y5R5 561 aa23.66■■□□□ 1.38
PTPRK-211ENST00000429595 PPP4R3CPQ6ZMV5 832 aa23.42■■□□□ 1.34
PTPRK-211ENST00000429595 CNKSR2Q8WXI2 1034 aa22.92■■□□□ 1.26
PTPRK-211ENST00000429595 HOXD11P31277 338 aaPredicted RBP22.84■■□□□ 1.25
PTPRK-211ENST00000429595 RNF216Q9NWF9 866 aaPredicted RBP22.68■■□□□ 1.22
PTPRK-211ENST00000429595 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
PTPRK-211ENST00000429595 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
PTPRK-211ENST00000429595 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
PTPRK-211ENST00000429595 RNF39Q9H2S5 420 aa22.14■■□□□ 1.13
PTPRK-211ENST00000429595 CACNB1Q02641 598 aaPredicted RBP22.11■■□□□ 1.13
PTPRK-211ENST00000429595 KCNA4P22459 653 aa21.99■■□□□ 1.11
PTPRK-211ENST00000429595 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
PTPRK-211ENST00000429595 C1QBPQ07021 282 aaKnown RBP21.77■■□□□ 1.08
PTPRK-211ENST00000429595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTPRK-211ENST00000429595 U3KPZ7 1027 aaPredicted RBP21.35■■□□□ 1.01
PTPRK-211ENST00000429595 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
PTPRK-211ENST00000429595 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
PTPRK-211ENST00000429595 CAPN15O75808 1086 aa20.89■□□□□ 0.93
PTPRK-211ENST00000429595 DSG3P32926 999 aa20.79■□□□□ 0.92
PTPRK-211ENST00000429595 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
PTPRK-211ENST00000429595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
PTPRK-211ENST00000429595 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
PTPRK-211ENST00000429595 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
PTPRK-211ENST00000429595 APLP2Q06481 763 aa20.6■□□□□ 0.89
PTPRK-211ENST00000429595 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.89
PTPRK-211ENST00000429595 MYCNP04198 464 aaPredicted RBP20.54■□□□□ 0.88
PTPRK-211ENST00000429595 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
PTPRK-211ENST00000429595 ABCB7O75027 752 aa20.46■□□□□ 0.87
PTPRK-211ENST00000429595 FOXD4L1Q9NU39 408 aa20.42■□□□□ 0.86
PTPRK-211ENST00000429595 ZBTB22O15209 634 aa20.27■□□□□ 0.84
PTPRK-211ENST00000429595 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
PTPRK-211ENST00000429595 POLA2Q14181 598 aa20.08■□□□□ 0.81
PTPRK-211ENST00000429595 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
PTPRK-211ENST00000429595 RBM42Q9BTD8 480 aaKnown RBP19.74■□□□□ 0.75
PTPRK-211ENST00000429595 POTEHQ6S545 545 aa19.66■□□□□ 0.74
PTPRK-211ENST00000429595 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
PTPRK-211ENST00000429595 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
PTPRK-211ENST00000429595 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
PTPRK-211ENST00000429595 AKT1S1Q96B36 256 aa19.35■□□□□ 0.69
PTPRK-211ENST00000429595 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
PTPRK-211ENST00000429595 MKRN4PQ13434 485 aaPredicted RBP19.23■□□□□ 0.67
PTPRK-211ENST00000429595 FBLN2P98095 1184 aa19.21■□□□□ 0.67
PTPRK-211ENST00000429595 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
PTPRK-211ENST00000429595 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
PTPRK-211ENST00000429595 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
PTPRK-211ENST00000429595 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
PTPRK-211ENST00000429595 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
PTPRK-211ENST00000429595 PITPNM1O00562 1244 aa19.02■□□□□ 0.64
PTPRK-211ENST00000429595 PIP4P2Q8N4L2 257 aa18.91■□□□□ 0.62
PTPRK-211ENST00000429595 SSUH2Q9Y2M2 353 aa18.89■□□□□ 0.61
PTPRK-211ENST00000429595 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
PTPRK-211ENST00000429595 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■□□□□ 8.5
PTPRK-211ENST00000429595 SPDYE1Q8NFV5 336 aaPredicted RBP18.69■□□□□ 0.58
PTPRK-211ENST00000429595 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
PTPRK-211ENST00000429595 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPRK-211ENST00000429595 PRKAR2AP13861 404 aaKnown RBP18.5■□□□□ 0.55
PTPRK-211ENST00000429595 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
PTPRK-211ENST00000429595 HAX1O00165 279 aa18.47■□□□□ 0.55
PTPRK-211ENST00000429595 EVX2Q03828 476 aa18.37■□□□□ 0.53
PTPRK-211ENST00000429595 PRR29P0C7W0 189 aa18.36■□□□□ 0.53
PTPRK-211ENST00000429595 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
PTPRK-211ENST00000429595 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
PTPRK-211ENST00000429595 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
PTPRK-211ENST00000429595 FARP1Q9Y4F1 1045 aaPredicted RBP18.06■□□□□ 0.48
PTPRK-211ENST00000429595 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
PTPRK-211ENST00000429595 CREBZFQ9NS37 354 aa18.02■□□□□ 0.48
PTPRK-211ENST00000429595 PROM2Q8N271 834 aa17.95■□□□□ 0.46
PTPRK-211ENST00000429595 CD44P16070 742 aaKnown RBP17.92■□□□□ 0.46
PTPRK-211ENST00000429595 GABBR2O75899 941 aa17.9■□□□□ 0.46
PTPRK-211ENST00000429595 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
PTPRK-211ENST00000429595 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
PTPRK-211ENST00000429595 ZNF579Q8NAF0 562 aaKnown RBP17.66■□□□□ 0.42
PTPRK-211ENST00000429595 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTPRK-211ENST00000429595 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
PTPRK-211ENST00000429595 FKBP8Q14318 412 aa17.56■□□□□ 0.4
PTPRK-211ENST00000429595 CLCN6P51797 869 aa17.55■□□□□ 0.4
PTPRK-211ENST00000429595 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
PTPRK-211ENST00000429595 PHF12Q96QT6 1004 aa17.49■□□□□ 0.39
PTPRK-211ENST00000429595 GALR2O43603 387 aaPredicted RBP17.47■□□□□ 0.39
PTPRK-211ENST00000429595 MIER1Q8N108 512 aa17.41■□□□□ 0.38
PTPRK-211ENST00000429595 DCBLD2Q96PD2 775 aa17.38■□□□□ 0.37
PTPRK-211ENST00000429595 TSPYL2Q9H2G4 693 aaPredicted RBP17.34■□□□□ 0.37
PTPRK-211ENST00000429595 LHX8Q68G74 356 aa17.33■□□□□ 0.36
PTPRK-211ENST00000429595 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
PTPRK-211ENST00000429595 PLCD3Q8N3E9 789 aa17.29■□□□□ 0.36
PTPRK-211ENST00000429595 CCDC61Q9Y6R9 512 aa17.29■□□□□ 0.36
PTPRK-211ENST00000429595 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms