RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
PTPRK-213ENST00000490332 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
PTPRK-213ENST00000490332 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
PTPRK-213ENST00000490332 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
PTPRK-213ENST00000490332 FOXD1Q16676 465 aa15.13■□□□□ 0.01
PTPRK-213ENST00000490332 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
PTPRK-213ENST00000490332 MSH5O43196 834 aa14.24□□□□□ -0.13
PTPRK-213ENST00000490332 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
PTPRK-213ENST00000490332 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
PTPRK-213ENST00000490332 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
PTPRK-213ENST00000490332 ADRA2BP18089 450 aa13.8□□□□□ -0.2
PTPRK-213ENST00000490332 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-213ENST00000490332 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
PTPRK-213ENST00000490332 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
PTPRK-213ENST00000490332 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-213ENST00000490332 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
PTPRK-213ENST00000490332 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
PTPRK-213ENST00000490332 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-213ENST00000490332 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
PTPRK-213ENST00000490332 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
PTPRK-213ENST00000490332 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-213ENST00000490332 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
PTPRK-213ENST00000490332 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
PTPRK-213ENST00000490332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.576e-8■□□□□ 10.5
PTPRK-213ENST00000490332 NISCHQ9Y2I1 1504 aa11.48□□□□□ -0.57
PTPRK-213ENST00000490332 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
PTPRK-213ENST00000490332 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
PTPRK-213ENST00000490332 POTEHQ6S545 545 aa11.35□□□□□ -0.59
PTPRK-213ENST00000490332 ABCC9O60706 1549 aa11.35□□□□□ -0.59
PTPRK-213ENST00000490332 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-213ENST00000490332 DSG3P32926 999 aa11.27□□□□□ -0.61
PTPRK-213ENST00000490332 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-213ENST00000490332 CAPN15O75808 1086 aa11.18□□□□□ -0.62
PTPRK-213ENST00000490332 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
PTPRK-213ENST00000490332 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
PTPRK-213ENST00000490332 ABCB7O75027 752 aa10.93□□□□□ -0.66
PTPRK-213ENST00000490332 TRHP20396 242 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-213ENST00000490332 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-213ENST00000490332 KCNA4P22459 653 aa10.82□□□□□ -0.68
PTPRK-213ENST00000490332 APLP2Q06481 763 aa10.82□□□□□ -0.68
PTPRK-213ENST00000490332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-213ENST00000490332 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
PTPRK-213ENST00000490332 CCDC180Q9P1Z9 1646 aa10.72□□□□□ -0.69
PTPRK-213ENST00000490332 SAMD1Q6SPF0 538 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-213ENST00000490332 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
PTPRK-213ENST00000490332 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
PTPRK-213ENST00000490332 POLA2Q14181 598 aa10.56□□□□□ -0.72
PTPRK-213ENST00000490332 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
PTPRK-213ENST00000490332 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-213ENST00000490332 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-213ENST00000490332 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTPRK-213ENST00000490332 AKT1S1Q96B36 256 aa10.39□□□□□ -0.75
PTPRK-213ENST00000490332 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
PTPRK-213ENST00000490332 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-213ENST00000490332 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
PTPRK-213ENST00000490332 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-213ENST00000490332 NACADO15069 1562 aa10.31□□□□□ -0.76
PTPRK-213ENST00000490332 ZBTB12Q9Y330 459 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-213ENST00000490332 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
PTPRK-213ENST00000490332 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
PTPRK-213ENST00000490332 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
PTPRK-213ENST00000490332 PITPNM1O00562 1244 aa10.22□□□□□ -0.77
PTPRK-213ENST00000490332 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■□□□□ 8.5
PTPRK-213ENST00000490332 CUX2O14529 1486 aa10.22□□□□□ -0.77
PTPRK-213ENST00000490332 HAX1O00165 279 aa10.2□□□□□ -0.78
PTPRK-213ENST00000490332 BICRAQ9NZM4 1560 aa10.2□□□□□ -0.78
PTPRK-213ENST00000490332 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
PTPRK-213ENST00000490332 TRIM41Q8WV44 630 aa10.16□□□□□ -0.78
PTPRK-213ENST00000490332 EVX2Q03828 476 aa10.15□□□□□ -0.78
PTPRK-213ENST00000490332 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
PTPRK-213ENST00000490332 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
PTPRK-213ENST00000490332 EIF4G1Q04637 1599 aaKnown RBP10.05□□□□□ -0.8
PTPRK-213ENST00000490332 ZBTB22O15209 634 aa9.98□□□□□ -0.81
PTPRK-213ENST00000490332 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
PTPRK-213ENST00000490332 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
PTPRK-213ENST00000490332 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
PTPRK-213ENST00000490332 MYO15BQ96JP2 1530 aa9.94□□□□□ -0.82
PTPRK-213ENST00000490332 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
PTPRK-213ENST00000490332 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
PTPRK-213ENST00000490332 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
PTPRK-213ENST00000490332 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
PTPRK-213ENST00000490332 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
PTPRK-213ENST00000490332 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-213ENST00000490332 FBLN2P98095 1184 aa9.85□□□□□ -0.83
PTPRK-213ENST00000490332 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-213ENST00000490332 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
PTPRK-213ENST00000490332 GABBR2O75899 941 aa9.84□□□□□ -0.83
PTPRK-213ENST00000490332 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
PTPRK-213ENST00000490332 LHX8Q68G74 356 aa9.8□□□□□ -0.84
PTPRK-213ENST00000490332 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
PTPRK-213ENST00000490332 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-213ENST00000490332 POTEIP0CG38 1075 aa9.68□□□□□ -0.86
PTPRK-213ENST00000490332 SCRIBQ14160 1630 aa9.65□□□□□ -0.86
PTPRK-213ENST00000490332 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
PTPRK-213ENST00000490332 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
PTPRK-213ENST00000490332 CD44P16070 742 aaKnown RBP9.58□□□□□ -0.88
PTPRK-213ENST00000490332 FARP1Q9Y4F1 1045 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-213ENST00000490332 BAZ1AQ9NRL2 1556 aaPredicted RBP9.55□□□□□ -0.88
PTPRK-213ENST00000490332 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-213ENST00000490332 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms