RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
KDM4C-206ENST00000438023 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
KDM4C-206ENST00000438023 MYT1Q01538 1121 aa21.91■■□□□ 1.1
KDM4C-206ENST00000438023 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
KDM4C-206ENST00000438023 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
KDM4C-206ENST00000438023 HRCP23327 699 aa21.39■■□□□ 1.01
KDM4C-206ENST00000438023 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
KDM4C-206ENST00000438023 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
KDM4C-206ENST00000438023 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
KDM4C-206ENST00000438023 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
KDM4C-206ENST00000438023 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
KDM4C-206ENST00000438023 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
KDM4C-206ENST00000438023 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
KDM4C-206ENST00000438023 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
KDM4C-206ENST00000438023 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.89
KDM4C-206ENST00000438023 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
KDM4C-206ENST00000438023 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
KDM4C-206ENST00000438023 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
KDM4C-206ENST00000438023 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
KDM4C-206ENST00000438023 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
KDM4C-206ENST00000438023 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.83
KDM4C-206ENST00000438023 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
KDM4C-206ENST00000438023 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
KDM4C-206ENST00000438023 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
KDM4C-206ENST00000438023 NEFLP07196 543 aa20.18■□□□□ 0.82
KDM4C-206ENST00000438023 DIEXFQ68CQ4 756 aaKnown RBP20.15■□□□□ 0.82
KDM4C-206ENST00000438023 APLP2Q06481 763 aa19.95■□□□□ 0.78
KDM4C-206ENST00000438023 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
KDM4C-206ENST00000438023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
KDM4C-206ENST00000438023 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
KDM4C-206ENST00000438023 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
KDM4C-206ENST00000438023 BCANQ96GW7 911 aa19.79■□□□□ 0.76
KDM4C-206ENST00000438023 RTL5Q5HYW3 569 aaPredicted RBP19.64■□□□□ 0.73
KDM4C-206ENST00000438023 BCL11AQ9H165 835 aa19.63■□□□□ 0.73
KDM4C-206ENST00000438023 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
KDM4C-206ENST00000438023 CCDC180Q9P1Z9 1646 aa19.53■□□□□ 0.72
KDM4C-206ENST00000438023 EIF5BO60841 1220 aaKnown RBP19.45■□□□□ 0.7
KDM4C-206ENST00000438023 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
KDM4C-206ENST00000438023 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
KDM4C-206ENST00000438023 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
KDM4C-206ENST00000438023 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
KDM4C-206ENST00000438023 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
KDM4C-206ENST00000438023 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
KDM4C-206ENST00000438023 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
KDM4C-206ENST00000438023 FKBP8Q14318 412 aa19.2■□□□□ 0.66
KDM4C-206ENST00000438023 ITGAEP38570 1179 aa19.11■□□□□ 0.65
KDM4C-206ENST00000438023 NBR1Q14596 966 aa19.11■□□□□ 0.65
KDM4C-206ENST00000438023 MIER1Q8N108 512 aa19.1■□□□□ 0.65
KDM4C-206ENST00000438023 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
KDM4C-206ENST00000438023 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
KDM4C-206ENST00000438023 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
KDM4C-206ENST00000438023 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
KDM4C-206ENST00000438023 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
KDM4C-206ENST00000438023 ANP32AP39687 249 aaKnown RBP18.93■□□□□ 0.62
KDM4C-206ENST00000438023 GLIPR1L2Q4G1C9 344 aa18.92■□□□□ 0.62
KDM4C-206ENST00000438023 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
KDM4C-206ENST00000438023 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
KDM4C-206ENST00000438023 NPM2Q86SE8 214 aaKnown RBP18.86■□□□□ 0.61
KDM4C-206ENST00000438023 ANP32CO43423 234 aa18.84■□□□□ 0.61
KDM4C-206ENST00000438023 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.61
KDM4C-206ENST00000438023 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
KDM4C-206ENST00000438023 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
KDM4C-206ENST00000438023 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
KDM4C-206ENST00000438023 DEKP35659 375 aaKnown RBP18.71■□□□□ 0.59
KDM4C-206ENST00000438023 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
KDM4C-206ENST00000438023 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
KDM4C-206ENST00000438023 RBM19Q9Y4C8 960 aaKnown RBP18.65■□□□□ 0.58
KDM4C-206ENST00000438023 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
KDM4C-206ENST00000438023 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
KDM4C-206ENST00000438023 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
KDM4C-206ENST00000438023 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
KDM4C-206ENST00000438023 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.57
KDM4C-206ENST00000438023 ARXQ96QS3 562 aa18.51■□□□□ 0.55
KDM4C-206ENST00000438023 NEFMP07197 916 aa18.46■□□□□ 0.54
KDM4C-206ENST00000438023 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
KDM4C-206ENST00000438023 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
KDM4C-206ENST00000438023 CEP162Q5TB80 1403 aa18.39■□□□□ 0.54
KDM4C-206ENST00000438023 ABCC9O60706 1549 aa18.36■□□□□ 0.53
KDM4C-206ENST00000438023 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
KDM4C-206ENST00000438023 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
KDM4C-206ENST00000438023 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
KDM4C-206ENST00000438023 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
KDM4C-206ENST00000438023 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
KDM4C-206ENST00000438023 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
KDM4C-206ENST00000438023 ERICH6BQ5W0A0 696 aa18.3■□□□□ 0.52
KDM4C-206ENST00000438023 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
KDM4C-206ENST00000438023 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
KDM4C-206ENST00000438023 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
KDM4C-206ENST00000438023 PPM1GO15355 546 aaPredicted RBP18.18■□□□□ 0.5
KDM4C-206ENST00000438023 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
KDM4C-206ENST00000438023 ANP32BQ92688 251 aaKnown RBP18.16■□□□□ 0.5
KDM4C-206ENST00000438023 PPP4R2Q9NY27 417 aa18.15■□□□□ 0.5
KDM4C-206ENST00000438023 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
KDM4C-206ENST00000438023 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
KDM4C-206ENST00000438023 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
KDM4C-206ENST00000438023 ARID4BQ4LE39 1312 aaPredicted RBP18.09■□□□□ 0.49
KDM4C-206ENST00000438023 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
KDM4C-206ENST00000438023 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
KDM4C-206ENST00000438023 SOGA1O94964 1423 aa18.07■□□□□ 0.48
KDM4C-206ENST00000438023 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms