Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC01006-201ENST00000333319 2292 ntBASIC24.53■■□□□ 1.52
COL15A1P39059 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 LINC01521-201ENST00000504184 1943 ntBASIC24.53■■□□□ 1.52
COL15A1P39059 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.53■■□□□ 1.52
COL15A1P39059 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.53■■□□□ 1.52
COL15A1P39059 PRSS44-201ENST00000515154 1146 ntBASIC24.53■■□□□ 1.52
COL15A1P39059 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.53■■□□□ 1.52
COL15A1P39059 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
COL15A1P39059 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL15A1P39059 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.52■■□□□ 1.52
COL15A1P39059 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.52■■□□□ 1.52
COL15A1P39059 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.52■■□□□ 1.52
COL15A1P39059 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 HCG4P8-203ENST00000443049 980 ntBASIC24.52■■□□□ 1.52
COL15A1P39059 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.52■■□□□ 1.52
COL15A1P39059 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC24.52■■□□□ 1.52
COL15A1P39059 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.52■■□□□ 1.52
COL15A1P39059 AC140113.3-201ENST00000605663 199 ntBASIC24.52■■□□□ 1.52
COL15A1P39059 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
COL15A1P39059 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL15A1P39059 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.52■■□□□ 1.52
COL15A1P39059 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.51■■□□□ 1.51
COL15A1P39059 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
COL15A1P39059 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
COL15A1P39059 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.51■■□□□ 1.51
COL15A1P39059 AC069148.1-201ENST00000608741 768 ntBASIC24.51■■□□□ 1.51
COL15A1P39059 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.51■■□□□ 1.51
COL15A1P39059 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
COL15A1P39059 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL15A1P39059 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.5■■□□□ 1.51
COL15A1P39059 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 KRT8P11-201ENST00000409686 1436 ntBASIC24.5■■□□□ 1.51
COL15A1P39059 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.5■■□□□ 1.51
COL15A1P39059 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.5■■□□□ 1.51
COL15A1P39059 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.5■■□□□ 1.51
COL15A1P39059 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.5■■□□□ 1.51
COL15A1P39059 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.5■■□□□ 1.51
COL15A1P39059 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL15A1P39059 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL15A1P39059 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL15A1P39059 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL15A1P39059 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL15A1P39059 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 AC112907.2-201ENST00000448639 330 ntBASIC24.49■■□□□ 1.51
COL15A1P39059 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 VENTXP5-201ENST00000523979 775 ntBASIC24.49■■□□□ 1.51
COL15A1P39059 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.49■■□□□ 1.51
COL15A1P39059 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.49■■□□□ 1.51
COL15A1P39059 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.49■■□□□ 1.51
COL15A1P39059 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.49■■□□□ 1.51
COL15A1P39059 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
COL15A1P39059 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
COL15A1P39059 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
COL15A1P39059 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
COL15A1P39059 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.48■■□□□ 1.51
COL15A1P39059 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.48■■□□□ 1.51
COL15A1P39059 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL15A1P39059 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms