Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC1P29353 TREX1-205ENST00000625293 1783 ntBASIC17.68■□□□□ 0.42
SHC1P29353 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
SHC1P29353 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.68■□□□□ 0.42
SHC1P29353 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SHC1P29353 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SHC1P29353 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.68■□□□□ 0.42
SHC1P29353 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 AC133681.1-201ENST00000465482 601 ntBASIC17.68■□□□□ 0.42
SHC1P29353 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.68■□□□□ 0.42
SHC1P29353 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHC1P29353 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC1P29353 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SHC1P29353 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC1P29353 AC120498.9-201ENST00000339021 3867 ntBASIC17.68■□□□□ 0.42
SHC1P29353 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SHC1P29353 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SHC1P29353 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHC1P29353 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHC1P29353 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.67■□□□□ 0.42
SHC1P29353 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SHC1P29353 FAM197Y4-202ENST00000622692 608 ntBASIC17.67■□□□□ 0.42
SHC1P29353 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.67■□□□□ 0.42
SHC1P29353 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.67■□□□□ 0.42
SHC1P29353 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC1P29353 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC1P29353 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.66■□□□□ 0.42
SHC1P29353 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHC1P29353 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SHC1P29353 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.66■□□□□ 0.42
SHC1P29353 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.66■□□□□ 0.42
SHC1P29353 AC110285.5-201ENST00000611501 352 ntBASIC17.66■□□□□ 0.42
SHC1P29353 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
SHC1P29353 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SHC1P29353 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHC1P29353 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms