Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHATP28329 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 AL161938.1-201ENST00000569833 2180 ntBASIC16.44■□□□□ 0.22
CHATP28329 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 ID1-201ENST00000376105 1233 ntBASIC16.44■□□□□ 0.22
CHATP28329 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.44■□□□□ 0.22
CHATP28329 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
CHATP28329 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHATP28329 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CHATP28329 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.43■□□□□ 0.22
CHATP28329 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 AC141586.3-201ENST00000562166 1838 ntBASIC16.43■□□□□ 0.22
CHATP28329 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHATP28329 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CHATP28329 AC073210.2-201ENST00000430369 194 ntBASIC16.43■□□□□ 0.22
CHATP28329 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.43■□□□□ 0.22
CHATP28329 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.43■□□□□ 0.22
CHATP28329 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHATP28329 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 TEX21P-204ENST00000641479 1693 ntBASIC16.43■□□□□ 0.22
CHATP28329 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHATP28329 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.43■□□□□ 0.22
CHATP28329 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.43■□□□□ 0.22
CHATP28329 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 AL138781.2-201ENST00000617896 1843 ntBASIC16.42■□□□□ 0.22
CHATP28329 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.42■□□□□ 0.22
CHATP28329 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 MKRN4P-201ENST00000444706 1521 ntBASIC16.42■□□□□ 0.22
CHATP28329 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CHATP28329 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.42■□□□□ 0.22
CHATP28329 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.42■□□□□ 0.22
CHATP28329 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.42■□□□□ 0.22
CHATP28329 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.42■□□□□ 0.22
CHATP28329 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CHATP28329 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CHATP28329 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 ZNF815P-204ENST00000434898 1737 ntBASIC16.42■□□□□ 0.22
CHATP28329 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHATP28329 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHATP28329 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHATP28329 CROCCP3-202ENST00000420820 1947 ntBASIC16.41■□□□□ 0.22
CHATP28329 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHATP28329 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHATP28329 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHATP28329 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.41■□□□□ 0.22
CHATP28329 AL390719.1-204ENST00000412397 1219 ntBASIC16.41■□□□□ 0.22
CHATP28329 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHATP28329 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.41■□□□□ 0.22
CHATP28329 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.41■□□□□ 0.22
CHATP28329 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms