Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
VARSP26640 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.94■□□□□ 0.62
VARSP26640 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
VARSP26640 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 AC073912.3-201ENST00000624414 853 ntBASIC18.94■□□□□ 0.62
VARSP26640 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VARSP26640 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 Z82202.1-201ENST00000623446 1880 ntBASIC18.93■□□□□ 0.62
VARSP26640 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VARSP26640 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.93■□□□□ 0.62
VARSP26640 MIR4497-201ENST00000583208 89 ntBASIC18.93■□□□□ 0.62
VARSP26640 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.93■□□□□ 0.62
VARSP26640 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.93■□□□□ 0.62
VARSP26640 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VARSP26640 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VARSP26640 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.93■□□□□ 0.62
VARSP26640 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
VARSP26640 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 LTB4R2-202ENST00000528054 3092 ntBASIC18.92■□□□□ 0.62
VARSP26640 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.92■□□□□ 0.62
VARSP26640 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
VARSP26640 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.92■□□□□ 0.62
VARSP26640 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VARSP26640 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.92■□□□□ 0.62
VARSP26640 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.92■□□□□ 0.62
VARSP26640 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VARSP26640 AL121906.2-201ENST00000621597 723 ntBASIC18.92■□□□□ 0.62
VARSP26640 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VARSP26640 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
VARSP26640 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
VARSP26640 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARSP26640 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
VARSP26640 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
VARSP26640 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.91■□□□□ 0.62
VARSP26640 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 POM121L13P-201ENST00000422362 380 ntBASIC18.91■□□□□ 0.62
VARSP26640 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.91■□□□□ 0.62
VARSP26640 RPPH1-201ENST00000516869 333 ntBASIC18.91■□□□□ 0.62
VARSP26640 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms