Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.22■□□□□ 0.19
LMO1P25800 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LMO1P25800 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.22■□□□□ 0.19
LMO1P25800 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 RNA5SP413-201ENST00000516373 109 ntBASIC16.22■□□□□ 0.19
LMO1P25800 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.22■□□□□ 0.19
LMO1P25800 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.22■□□□□ 0.19
LMO1P25800 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LMO1P25800 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LMO1P25800 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.22■□□□□ 0.19
LMO1P25800 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LMO1P25800 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LMO1P25800 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LMO1P25800 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LMO1P25800 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LMO1P25800 KRT18P6-201ENST00000555540 1265 ntBASIC16.21■□□□□ 0.19
LMO1P25800 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.21■□□□□ 0.19
LMO1P25800 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.21■□□□□ 0.19
LMO1P25800 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.21■□□□□ 0.19
LMO1P25800 AC141586.3-201ENST00000562166 1838 ntBASIC16.21■□□□□ 0.19
LMO1P25800 AL138781.2-201ENST00000617896 1843 ntBASIC16.21■□□□□ 0.19
LMO1P25800 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LMO1P25800 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.21■□□□□ 0.19
LMO1P25800 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO1P25800 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO1P25800 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
LMO1P25800 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.2■□□□□ 0.18
LMO1P25800 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO1P25800 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.2■□□□□ 0.18
LMO1P25800 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.2■□□□□ 0.18
LMO1P25800 MTDHP1-201ENST00000605323 784 ntBASIC16.2■□□□□ 0.18
LMO1P25800 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LMO1P25800 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LMO1P25800 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LMO1P25800 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO1P25800 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
LMO1P25800 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.19■□□□□ 0.18
LMO1P25800 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO1P25800 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO1P25800 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LMO1P25800 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.19■□□□□ 0.18
LMO1P25800 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO1P25800 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LMO1P25800 NBPF21P-201ENST00000425093 1451 ntBASIC16.19■□□□□ 0.18
LMO1P25800 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LMO1P25800 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO1P25800 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LMO1P25800 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms