Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 CDV3P1-201ENST00000471403 739 ntBASIC17.88■□□□□ 0.45
NR4A1P22736 AF201337.1-201ENST00000520239 748 ntBASIC17.88■□□□□ 0.45
NR4A1P22736 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.88■□□□□ 0.45
NR4A1P22736 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.88■□□□□ 0.45
NR4A1P22736 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 AC020916.1-201ENST00000587762 1774 ntBASIC17.88■□□□□ 0.45
NR4A1P22736 AC135050.7-201ENST00000624508 2218 ntBASIC17.88■□□□□ 0.45
NR4A1P22736 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NR4A1P22736 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NR4A1P22736 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NR4A1P22736 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
NR4A1P22736 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 HLA-L-209ENST00000420110 1011 ntBASIC17.87■□□□□ 0.45
NR4A1P22736 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.87■□□□□ 0.45
NR4A1P22736 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NR4A1P22736 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.87■□□□□ 0.45
NR4A1P22736 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR4A1P22736 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.86■□□□□ 0.45
NR4A1P22736 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NR4A1P22736 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.86■□□□□ 0.45
NR4A1P22736 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 AC105036.2-201ENST00000569468 176 ntBASIC17.86■□□□□ 0.45
NR4A1P22736 AL109923.1-201ENST00000618799 583 ntBASIC17.86■□□□□ 0.45
NR4A1P22736 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NR4A1P22736 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
NR4A1P22736 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.86■□□□□ 0.45
NR4A1P22736 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR4A1P22736 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NR4A1P22736 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.85■□□□□ 0.45
NR4A1P22736 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.85■□□□□ 0.45
NR4A1P22736 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 RARRES2P4-201ENST00000514074 484 ntBASIC17.85■□□□□ 0.45
NR4A1P22736 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR4A1P22736 AC104771.1-201ENST00000603335 964 ntBASIC17.85■□□□□ 0.45
NR4A1P22736 AC016405.3-201ENST00000607710 860 ntBASIC17.85■□□□□ 0.45
NR4A1P22736 FAM21FP-204ENST00000608637 956 ntBASIC17.85■□□□□ 0.45
NR4A1P22736 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.85■□□□□ 0.45
NR4A1P22736 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms