Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 FP475955.4-201ENST00000623131 1990 ntBASIC17.92■□□□□ 0.46
TNFRSF1BP20333 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 DUSP5P2-201ENST00000426873 1033 ntBASIC17.92■□□□□ 0.46
TNFRSF1BP20333 CROCCP5-201ENST00000436658 830 ntBASIC17.92■□□□□ 0.46
TNFRSF1BP20333 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF1BP20333 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 MIPEPP3-201ENST00000412105 444 ntBASIC17.91■□□□□ 0.46
TNFRSF1BP20333 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF1BP20333 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF1BP20333 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms