Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB2P17787 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRNB2P17787 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB2P17787 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB2P17787 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHRNB2P17787 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHRNB2P17787 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB2P17787 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB2P17787 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 IRX1P1-201ENST00000438849 1838 ntBASIC20.49■□□□□ 0.87
CHRNB2P17787 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.49■□□□□ 0.87
CHRNB2P17787 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB2P17787 RN7SL471P-201ENST00000580476 299 ntBASIC20.49■□□□□ 0.87
CHRNB2P17787 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.49■□□□□ 0.87
CHRNB2P17787 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB2P17787 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.49■□□□□ 0.87
CHRNB2P17787 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB2P17787 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB2P17787 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CHRNB2P17787 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.48■□□□□ 0.87
CHRNB2P17787 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.48■□□□□ 0.87
CHRNB2P17787 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 AC124016.1-201ENST00000609552 612 ntBASIC20.48■□□□□ 0.87
CHRNB2P17787 AC006333.2-201ENST00000607957 2099 ntBASIC20.48■□□□□ 0.87
CHRNB2P17787 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CHRNB2P17787 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB2P17787 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CHRNB2P17787 CROCCP3-202ENST00000420820 1947 ntBASIC20.47■□□□□ 0.87
CHRNB2P17787 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHRNB2P17787 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRNB2P17787 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHRNB2P17787 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 AC006058.3-201ENST00000606217 1069 ntBASIC20.47■□□□□ 0.87
CHRNB2P17787 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.47■□□□□ 0.87
CHRNB2P17787 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB2P17787 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRNB2P17787 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CHRNB2P17787 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB2P17787 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHRNB2P17787 AC239809.2-201ENST00000415381 517 ntBASIC20.46■□□□□ 0.87
CHRNB2P17787 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 CD99P1-205ENST00000527459 561 ntBASIC20.46■□□□□ 0.87
CHRNB2P17787 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.46■□□□□ 0.87
CHRNB2P17787 AC004264.1-201ENST00000608354 794 ntBASIC20.46■□□□□ 0.87
CHRNB2P17787 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.46■□□□□ 0.87
CHRNB2P17787 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNB2P17787 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHRNB2P17787 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRNB2P17787 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.46■□□□□ 0.87
CHRNB2P17787 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNB2P17787 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRNB2P17787 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms