Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMIM17P0DL12 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SMIM17P0DL12 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.35□□□□□ -0.11
SMIM17P0DL12 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 KRT19P1-201ENST00000405746 1186 ntBASIC14.35□□□□□ -0.11
SMIM17P0DL12 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 AL139246.5-201ENST00000606645 996 ntBASIC14.35□□□□□ -0.11
SMIM17P0DL12 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 AC007613.1-201ENST00000572811 2597 ntBASIC14.35□□□□□ -0.11
SMIM17P0DL12 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 AC019069.1-201ENST00000610008 1333 ntBASIC14.35□□□□□ -0.11
SMIM17P0DL12 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SMIM17P0DL12 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM17P0DL12 AP001271.2-201ENST00000624018 1556 ntBASIC14.34□□□□□ -0.11
SMIM17P0DL12 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 AC123595.1-201ENST00000440769 1046 ntBASIC14.34□□□□□ -0.11
SMIM17P0DL12 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SMIM17P0DL12 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM17P0DL12 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM17P0DL12 KRT8P17-201ENST00000453110 1448 ntBASIC14.33□□□□□ -0.11
SMIM17P0DL12 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM17P0DL12 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM17P0DL12 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM17P0DL12 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.33□□□□□ -0.11
SMIM17P0DL12 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM17P0DL12 AL356309.3-201ENST00000624132 1934 ntBASIC14.33□□□□□ -0.11
SMIM17P0DL12 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM17P0DL12 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms