Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.25■□□□□ 0.99
TPM1P09493 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 AC016769.1-201ENST00000409132 1010 ntBASIC21.25■□□□□ 0.99
TPM1P09493 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.25■□□□□ 0.99
TPM1P09493 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.25■□□□□ 0.99
TPM1P09493 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TPM1P09493 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 AC007613.1-201ENST00000572811 2597 ntBASIC21.25■□□□□ 0.99
TPM1P09493 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM1P09493 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
TPM1P09493 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TPM1P09493 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TPM1P09493 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 AC020916.1-201ENST00000587762 1774 ntBASIC21.24■□□□□ 0.99
TPM1P09493 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 AL355472.2-201ENST00000422958 438 ntBASIC21.24■□□□□ 0.99
TPM1P09493 CNN2P6-201ENST00000439038 900 ntBASIC21.24■□□□□ 0.99
TPM1P09493 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM1P09493 AC141586.3-201ENST00000562166 1838 ntBASIC21.24■□□□□ 0.99
TPM1P09493 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.24■□□□□ 0.99
TPM1P09493 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM1P09493 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM1P09493 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 CROCCP3-202ENST00000420820 1947 ntBASIC21.23■□□□□ 0.99
TPM1P09493 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 CYP2T1P-201ENST00000432607 1285 ntBASIC21.23■□□□□ 0.99
TPM1P09493 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.23■□□□□ 0.99
TPM1P09493 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TPM1P09493 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.23■□□□□ 0.99
TPM1P09493 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TPM1P09493 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM1P09493 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.22■□□□□ 0.99
TPM1P09493 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.22■□□□□ 0.99
TPM1P09493 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.22■□□□□ 0.99
TPM1P09493 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.22■□□□□ 0.99
TPM1P09493 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.22■□□□□ 0.99
TPM1P09493 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TPM1P09493 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TPM1P09493 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 AC116351.2-201ENST00000606540 1585 ntBASIC21.22■□□□□ 0.99
TPM1P09493 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM1P09493 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM1P09493 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM1P09493 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM1P09493 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM1P09493 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms