Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
MMP3P08254 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP3P08254 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.4■■□□□ 1.02
MMP3P08254 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP3P08254 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP3P08254 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
MMP3P08254 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP3P08254 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.4■■□□□ 1.02
MMP3P08254 AP000550.4-202ENST00000639755 178 ntBASIC21.4■■□□□ 1.02
MMP3P08254 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MMP3P08254 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP3P08254 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MMP3P08254 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MMP3P08254 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
MMP3P08254 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP3P08254 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.39■■□□□ 1.02
MMP3P08254 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.39■■□□□ 1.02
MMP3P08254 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.39■■□□□ 1.02
MMP3P08254 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.39■■□□□ 1.02
MMP3P08254 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.39■■□□□ 1.01
MMP3P08254 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.39■■□□□ 1.01
MMP3P08254 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 KRT18P38-201ENST00000449496 1282 ntBASIC21.39■■□□□ 1.01
MMP3P08254 AL671277.2-201ENST00000458060 996 ntBASIC21.39■■□□□ 1.01
MMP3P08254 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.39■■□□□ 1.01
MMP3P08254 FAM86EP-206ENST00000510506 987 ntBASIC21.39■■□□□ 1.01
MMP3P08254 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
MMP3P08254 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.39■■□□□ 1.01
MMP3P08254 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.39■■□□□ 1.01
MMP3P08254 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP3P08254 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 ZNF815P-204ENST00000434898 1737 ntBASIC21.38■■□□□ 1.01
MMP3P08254 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP3P08254 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
MMP3P08254 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
MMP3P08254 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP3P08254 AC009947.2-201ENST00000444014 672 ntBASIC21.38■■□□□ 1.01
MMP3P08254 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.38■■□□□ 1.01
MMP3P08254 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP3P08254 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.38■■□□□ 1.01
MMP3P08254 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.38■■□□□ 1.01
MMP3P08254 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
MMP3P08254 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MMP3P08254 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.37■■□□□ 1.01
MMP3P08254 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
MMP3P08254 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
MMP3P08254 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.37■■□□□ 1.01
MMP3P08254 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 PCED1CP-201ENST00000419887 785 ntBASIC21.37■■□□□ 1.01
MMP3P08254 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 MIR4674-201ENST00000582457 87 ntBASIC21.37■■□□□ 1.01
MMP3P08254 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
MMP3P08254 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.37■■□□□ 1.01
MMP3P08254 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP3P08254 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MMP3P08254 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.37■■□□□ 1.01
MMP3P08254 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
MMP3P08254 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
MMP3P08254 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP3P08254 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP3P08254 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP3P08254 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.36■■□□□ 1.01
MMP3P08254 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP3P08254 AP000523.1-201ENST00000398242 1049 ntBASIC21.36■■□□□ 1.01
MMP3P08254 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms