Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.49■□□□□ 0.71
RETP07949 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.49■□□□□ 0.71
RETP07949 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
RETP07949 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.49■□□□□ 0.71
RETP07949 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RETP07949 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RETP07949 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RETP07949 AC005332.1-201ENST00000577698 1310 ntBASIC19.49■□□□□ 0.71
RETP07949 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.49■□□□□ 0.71
RETP07949 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.48■□□□□ 0.71
RETP07949 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.48■□□□□ 0.71
RETP07949 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RETP07949 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.48■□□□□ 0.71
RETP07949 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RETP07949 MFAP1P1-201ENST00000442257 1255 ntBASIC19.48■□□□□ 0.71
RETP07949 AC011298.2-201ENST00000617989 482 ntBASIC19.48■□□□□ 0.71
RETP07949 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RETP07949 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RETP07949 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
RETP07949 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.48■□□□□ 0.71
RETP07949 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.48■□□□□ 0.71
RETP07949 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RETP07949 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RETP07949 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.48■□□□□ 0.71
RETP07949 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RETP07949 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RETP07949 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
RETP07949 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 AL162377.1-201ENST00000618844 1793 ntBASIC19.47■□□□□ 0.71
RETP07949 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 AC096733.2-201ENST00000609937 1394 ntBASIC19.47■□□□□ 0.71
RETP07949 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.47■□□□□ 0.71
RETP07949 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.47■□□□□ 0.71
RETP07949 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.47■□□□□ 0.71
RETP07949 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.47■□□□□ 0.71
RETP07949 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.47■□□□□ 0.71
RETP07949 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.47■□□□□ 0.71
RETP07949 RCC2P6-201ENST00000526625 1557 ntBASIC19.47■□□□□ 0.71
RETP07949 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.47■□□□□ 0.71
RETP07949 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RETP07949 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RETP07949 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.47■□□□□ 0.71
RETP07949 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RETP07949 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
RETP07949 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RETP07949 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
RETP07949 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RETP07949 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.46■□□□□ 0.71
RETP07949 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RETP07949 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.46■□□□□ 0.71
RETP07949 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 AC140113.3-201ENST00000605663 199 ntBASIC19.46■□□□□ 0.71
RETP07949 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 AL391422.3-201ENST00000603791 2761 ntBASIC19.46■□□□□ 0.71
RETP07949 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RETP07949 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 AC092338.2-201ENST00000568827 1415 ntBASIC19.45■□□□□ 0.7
RETP07949 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms