Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 AC093525.10-201ENST00000625130 1569 ntBASIC12.08□□□□□ -0.48
APOBP04114 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 MIR574-201ENST00000385209 96 ntBASIC12.08□□□□□ -0.48
APOBP04114 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
APOBP04114 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.08□□□□□ -0.48
APOBP04114 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.08□□□□□ -0.48
APOBP04114 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 KRT8P11-201ENST00000409686 1436 ntBASIC12.08□□□□□ -0.48
APOBP04114 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.08□□□□□ -0.48
APOBP04114 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOBP04114 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.08□□□□□ -0.48
APOBP04114 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.08□□□□□ -0.48
APOBP04114 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
APOBP04114 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.07□□□□□ -0.48
APOBP04114 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.07□□□□□ -0.48
APOBP04114 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 AL121672.3-201ENST00000608644 468 ntBASIC12.07□□□□□ -0.48
APOBP04114 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.07□□□□□ -0.48
APOBP04114 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.07□□□□□ -0.48
APOBP04114 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC12.07□□□□□ -0.48
APOBP04114 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOBP04114 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.06□□□□□ -0.48
APOBP04114 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.06□□□□□ -0.48
APOBP04114 LINC00265-3P-201ENST00000447588 903 ntBASIC12.06□□□□□ -0.48
APOBP04114 AL157888.1-201ENST00000631930 593 ntBASIC12.06□□□□□ -0.48
APOBP04114 KRT8P8-201ENST00000434750 1448 ntBASIC12.06□□□□□ -0.48
APOBP04114 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
APOBP04114 AC036111.1-201ENST00000533973 1582 ntBASIC12.06□□□□□ -0.48
APOBP04114 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.06□□□□□ -0.48
APOBP04114 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOBP04114 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.06□□□□□ -0.48
APOBP04114 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.06□□□□□ -0.48
APOBP04114 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 BX640515.1-201ENST00000617215 977 ntBASIC12.06□□□□□ -0.48
APOBP04114 AF228730.7-201ENST00000641842 219 ntBASIC12.06□□□□□ -0.48
APOBP04114 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 CHCHD2P8-201ENST00000429873 447 ntBASIC12.06□□□□□ -0.48
APOBP04114 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.06□□□□□ -0.48
APOBP04114 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.06□□□□□ -0.48
APOBP04114 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
APOBP04114 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.06□□□□□ -0.48
APOBP04114 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOBP04114 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.05□□□□□ -0.48
APOBP04114 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 AL117328.2-201ENST00000624617 1940 ntBASIC12.05□□□□□ -0.48
APOBP04114 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOBP04114 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.05□□□□□ -0.48
APOBP04114 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.05□□□□□ -0.48
APOBP04114 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms